Detailed information of amic_s0054.g62.t1 in Acropora microphthalma

Genomic Location: sc0000054_pilon:791285...802779
NR annotation: XP_029194389.2, synaptonemal complex protein 1-like isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03410Synaptonemal complex protein 1 OS=Rattus norvegicus OX=10116 GN=Sycp1 PE=1 SV=2
Q15431Synaptonemal complex protein 1 OS=Homo sapiens OX=9606 GN=SYCP1 PE=1 SV=2
Q62209Synaptonemal complex protein 1 OS=Mus musculus OX=10090 GN=Sycp1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005881 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05483
all species →		SCP-1Synaptonemal complex protein 1 (SCP-1)Coiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008827
all species →		FamilySynaptonemal complex protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46918
all species →		SYNAPTONEMAL COMPLEX PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000795
all species →		Cellular Componentsynaptonemal complexInterproscan
GO:0007130
all species →		Biological Processsynaptonemal complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0054.g62.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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