Detailed information of amic_s0054.g91.t1 in Acropora microphthalma

Genomic Location: sc0000054_pilon:1206061...1227074
NR annotation: XP_029194398.2, pentatricopeptide repeat domain-containing protein 3, mitochondrial-like isoform X1 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004283 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01535
all species →		PPRPPR repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037387
all species →		FamilyPentatricopeptide repeat domain-containing protein 3Interproscan
IPR002885
all species →		RepeatPentatricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16276
all species →		PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0032543
all species →		Biological Processmitochondrial translationInterproscan
GO:0043024
all species →		Molecular Functionribosomal small subunit bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0054.g91.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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