Gene detail

Detailed information of amic_s0055.g12.t1 in Acropora microphthalma

Genomic Location: sc0000055_pilon:391746...394288
NR annotation: XP_015778344.1, PREDICTED: cilia- and flagella-associated protein 20 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PBJ2	Cilia- and flagella-associated protein 20 OS=Danio rerio OX=7955 GN=cfap20 PE=2 SV=1
Q6GPY6	Cilia- and flagella-associated protein 20 OS=Xenopus laevis OX=8355 GN=cfap20 PE=2 SV=1
Q6GL74	Cilia- and flagella-associated protein 20 OS=Xenopus tropicalis OX=8364 GN=cfap20 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008772 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05018 all species →	CFA20_dom	CFA20 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040441 all species →	Family	Cilia- and flagella-associated protein 20/CFAP20DC	Interproscan
IPR007714 all species →	Domain	CFA20 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12458 all species →	ORF PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031514 all species →	Cellular Component	motile cilium	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0060296 all species →	Biological Process	regulation of cilium beat frequency involved in ciliary motility	Interproscan
GO:2000147 all species →	Biological Process	positive regulation of cell motility	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25470	CFAP20; cilia- and flagella-associated protein 20	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.