Detailed information of amic_s0056.g45.t1 in Acropora microphthalma

Genomic Location: sc0000056_pilon:809138...809998
NR annotation: XP_044171468.1, ras-related protein Rab-30-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q17QB7Ras-related protein Rab-30 OS=Bos taurus OX=9913 GN=RAB30 PE=2 SV=1
Q15771Ras-related protein Rab-30 OS=Homo sapiens OX=9606 GN=RAB30 PE=1 SV=2
Q923S9Ras-related protein Rab-30 OS=Mus musculus OX=10090 GN=Rab30 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000048 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071
all species →		RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806
all species →		FamilySmall GTPaseInterproscan
IPR005225
all species →		DomainSmall GTP-binding protein domainInterproscan
IPR050227
all species →		FamilyRas-related protein RabInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47977
all species →		RAS-RELATED PROTEIN RABInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0005802
all species →		Cellular Componenttrans-Golgi networkInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0031985
all species →		Cellular ComponentGolgi cisternaInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0056.g45.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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