Detailed information of amic_s0056.g65.t1 in Acropora microphthalma

Genomic Location: sc0000056_pilon:1065155...1069244
NR annotation: XP_044181735.1, LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q13310Polyadenylate-binding protein 4 OS=Homo sapiens OX=9606 GN=PABPC4 PE=1 SV=1
F1QB54Polyadenylate-binding protein 1A OS=Danio rerio OX=7955 GN=pabpc1a PE=1 SV=1
P29341Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001523 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00658
all species →		PABPPoly-adenylate binding protein, unique domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002004
all species →		DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR036053
all species →		Homologous_superfamilyPABC (PABP) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46276
all species →		E3 UBIQUITIN-PROTEIN LIGASE UBR5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0034450
all species →		Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0090263
all species →		Biological Processpositive regulation of canonical Wnt signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0056.g65.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP