Detailed information of amic_s0057.g1.t1 in Acropora microphthalma

Genomic Location: sc0000057_pilon:1...26749
NR annotation: XP_044173837.1, LOW QUALITY PROTEIN: D-alanine--D-alanine ligase-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B5YFT1D-alanine--D-alanine ligase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=ddl PE=3 SV=1
Q748D8D-alanine--D-alanine ligase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=ddl PE=3 SV=1
B8I590D-alanine--D-alanine ligase OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=ddl PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005446 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07478
all species →
Dala_Dala_lig_CD-ala D-ala ligase C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011095
all species →
DomainD-alanine--D-alanine ligase, C-terminalInterproscan
IPR013815
all species →
Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR011761
all species →
DomainATP-grasp foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23132
all species →
D-ALANINE--D-ALANINE LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008716
all species →
Molecular FunctionD-alanine-D-alanine ligase activityInterproscan
GO:0009252
all species →
Biological Processpeptidoglycan biosynthetic processInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0057.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP