Detailed information of amic_s0058.g3.t1 in Acropora microphthalma

Genomic Location: sc0000058_pilon:124142...129645
NR annotation: XP_015765505.1, PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X1 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8CBC7tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Mus musculus OX=10090 GN=Ftsj1 PE=1 SV=1
Q9UET6tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Homo sapiens OX=9606 GN=FTSJ1 PE=1 SV=2
O36015tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=trm7 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007213 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01728
all species →		FtsJFtsJ-like methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015507
all species →		FamilyRibosomal RNA large subunit methyltransferase EInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR028590
all species →		FamilytRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase TRM7Interproscan
IPR002877
all species →		DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR050082
all species →		FamilyRibosomal RNA large subunit methyltransferase RlmEInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10920
all species →		RIBOSOMAL RNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001510
all species →		Biological ProcessRNA methylationInterproscan
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0008033
all species →		Biological ProcesstRNA processingInterproscan
GO:0008175
all species →		Molecular FunctiontRNA methyltransferase activityInterproscan
GO:0032259
all species →		Biological ProcessmethylationInterproscan
GO:0002181
all species →		Biological Processcytoplasmic translationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008173
all species →		Molecular FunctionRNA methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14864FTSJ1, TRM7; tRNA (cytidine32/guanosine34-2'-O)-methyltransferaseEC:2.1.1.205
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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