Gene detail

Detailed information of amic_s0060.g15.t2 in Acropora microphthalma

Genomic Location: sc0000060_pilon:425396...458264
NR annotation: CAH3186536.1, unnamed protein product, partial [Porites evermanni]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0060.g15.t2

ATGGCTAGCGAGAATTCTACCGAAGCTGAATGGACCGCGCCAAGCACCTTCTATTTGAAGGAGATTCCCATTCTCAATACATTCACCCCAGATCCAGCGGCGTTGCTCGAATATGTTGTCAATTTTCAAACAAGACCTGATGATGTGATCCTTGTGAGTTACCCAAAATCAGGGACGACCTGGATGCGGGAAATATTATGGCAATTGTATAACAATGGAGAAGTAACTGAAAGAAAAGTATTTGAAAGAGTTCCATTGTTGGAGGCTGAATTGGACATTAATGTCCAAGTAAGTGTCAGAACTCTCCCCAGTCCTCGCCTCATCAGTAGTCACCTTACTTATGACGTCATACCGAAAGGAGAGGGATGCAAGTATATTTACATTGCACGAAATCCAAAGGACGTGGCAGTTTCATATTATGAATTCATGAAAGCACATGGTCTATCTGGTGGCTATAATGGACCATGGGAATTTTTTGCGAGAATATTTGTGGAAGGAAAAGCTCCTTTTGGATTGTGGAACAAACATGTTCTGGAATGGTGGAAGCGTAAAGATAATTCTAATGTGTTATTTCTGAAATATGAGGACTTGAAAAAGGATTTAACCGCTAATATTTGGCAAATTGCAGAGTTCCTTGAAAAGCCCGTTTCTAACGACATCGTTAATAAAATCACTCATCAGTGCACCTTTAAGGAAATGAAAAAGAACATGTCCACATTCACTTTAATAGATGATCTCAAAGTTTTACGAAAAGGAGAAATTGGTGACTGGAAGAATTACTTTACACCAGAAATTGAAAAGCGCTTTGAGACTGACGTGATGAAGGAGCTTATGGATACAGATCCAGCGGCCTTGCAAGATTACGTTGTGAATTTTCAAACCAGACGTGACGATGTATTCATTGTGAGTTACCCAAAATCAGGGACCACCTGGATGCGGGAAATATTATGGCAGTTGTATAACAATGGAGAAGTAAGTGAAAGAAAAGTATTTGAAAGAGTTCCATTGTTGGAGCGTGCATTTGACATTAAAGGCCAACCAGGTGTCAGAACTCTCCCCAGTCCTCGCCTCATCAGTAGTCACCTTACTTATGATGTCACACCTAAAGGAAAGGGATGCAAGTATATGTACATTGCACGAAATCCAAAGGATGTGGCAGTTTCATTTTATGAGTTCATGAAAGCGCAAGGTTCAGCTGGTGGCTTTAATGGTCCATGGGAATTTTTTGCAAGAATATTTTTAGAAGGAAAAGTTCCTTTTGGATTGTGGAACAAACATGTTCTAGGGTGGTGGAAGCATAAAGATGATTCTAATGTGTTATTTCTGAAATATGAGGACCTGAAAAAGGATTTATCCAGCAGTATTCGGCTAATGTCAGAGTTTCTTGAAAAGTCTGTTTCTGAAGACATAATTAACAAAATCGCTCATCAGTGTACCTTCAAGGAAATGGCAAAGTGCACGTCCAAGTTTAGTGTGGGTGATCTCAAATTTTTACGAAAAGGAGAAATTGGTGACTGGAAGAATTACTTTACACCAGAAATTGAAAAGCGCTTTGAGAGTGAGGTGATGAAGGAGCTTATGGACACAGATCCAGCGGCCTTGCAAGATTACGTTGCGAATTTTCAAACCAGGCATGACGATGTGTTCATTGTGAGTTATCCAAAATCAGGGACCACCTGGATGCGGGAAATATTATGGCAATTGTATAACAATGGAGAAGTAAGTGAAAGGAAAGTATTTGAAAGAGTTCCGTTGTTGGAGCGTGCATTTGACATTAAGGGCCAACCAGGTGTAAGAACTCTCCCCAGTCCTCGCCTCATAAGTAGTCACCTTACTTATGACATCACACCTAAAGGAAAGGGATGCAAGTACATGTACATTGCACGAAATCCAAAGGATGTGGCAGTTTCATTGTATGAGTTCATGAAAGCGCAAGGTTCAGCTGGTGGCTTTGATGGTCCATGGGAATTTTTTGCAAGAATATTTTTGGAAGGAAAAGGTCAGGAGACAACCTCAAATCAGCTGTCTTTCACTCTTTTTGAAATACTCAAGAACCCAGAAATTGAAAACAGACTAGTACAAGAAATTGAAACTGTACTTGGTTCTCGGGAATTTGTGGAATACAGAGACCTTGGAAACCTTCAGTTCCTTGGTCAGACCTTAAAGGAAAGCCTCAGACTTCATCCTCCAGTAGAGGCAACTTCTCGTGAAACAACAAGAGATGGCTACTTTGCTGGGCATTTCCTCCCCAAGGGAACTTCAGTACTCATTTGTTGGTTCGTATTACACCGACTTCCTGAATTTTGGCCAGAACCAAGAAAGTTTGATCCAGAGAGGTTTTCCACAGAAGCCAAGAGTCCAGGCCATGGTCGATCTGTTCCCTATTTTCCCTTTTCTCTTGGTCCTAGAACCTGTATTGGTCAAACATTTGCCCAGTTTGAGGCTCGTGTGCTAATGGCAAGACTGCTACAACAGTTTGAATTGAGTTTGATACCAGGGCAAAATGAGTTGCGTCATGAAGAAAGGCTGACTTTAAGGCCCAAAGGCGGGGTACAATGCATCATTAAGAGAAGAGGCACAGTTTCATGA

Transcript

amic_s0060.g15.t2

ACTAACCTTTCATTCATTCCTGTGGGAAAGCCTGGCGAGACGTTCTCTCTTTCGCAGTCACCCGTTGCATAATTTTGTTCAAGTTATGGCTAGCGAGAATTCTACCGAAGCTGAATGGACCGCGCCAAGCACCTTCTATTTGAAGGAGATTCCCATTCTCAATACATTCACCCCAGATCCAGCGGCGTTGCTCGAATATGTTGTCAATTTTCAAACAAGACCTGATGATGTGATCCTTGTGAGTTACCCAAAATCAGGGACGACCTGGATGCGGGAAATATTATGGCAATTGTATAACAATGGAGAAGTAACTGAAAGAAAAGTATTTGAAAGAGTTCCATTGTTGGAGGCTGAATTGGACATTAATGTCCAAGTAAGTGTCAGAACTCTCCCCAGTCCTCGCCTCATCAGTAGTCACCTTACTTATGACGTCATACCGAAAGGAGAGGGATGCAAGTATATTTACATTGCACGAAATCCAAAGGACGTGGCAGTTTCATATTATGAATTCATGAAAGCACATGGTCTATCTGGTGGCTATAATGGACCATGGGAATTTTTTGCGAGAATATTTGTGGAAGGAAAAGCTCCTTTTGGATTGTGGAACAAACATGTTCTGGAATGGTGGAAGCGTAAAGATAATTCTAATGTGTTATTTCTGAAATATGAGGACTTGAAAAAGGATTTAACCGCTAATATTTGGCAAATTGCAGAGTTCCTTGAAAAGCCCGTTTCTAACGACATCGTTAATAAAATCACTCATCAGTGCACCTTTAAGGAAATGAAAAAGAACATGTCCACATTCACTTTAATAGATGATCTCAAAGTTTTACGAAAAGGAGAAATTGGTGACTGGAAGAATTACTTTACACCAGAAATTGAAAAGCGCTTTGAGACTGACGTGATGAAGGAGCTTATGGATACAGATCCAGCGGCCTTGCAAGATTACGTTGTGAATTTTCAAACCAGACGTGACGATGTATTCATTGTGAGTTACCCAAAATCAGGGACCACCTGGATGCGGGAAATATTATGGCAGTTGTATAACAATGGAGAAGTAAGTGAAAGAAAAGTATTTGAAAGAGTTCCATTGTTGGAGCGTGCATTTGACATTAAAGGCCAACCAGGTGTCAGAACTCTCCCCAGTCCTCGCCTCATCAGTAGTCACCTTACTTATGATGTCACACCTAAAGGAAAGGGATGCAAGTATATGTACATTGCACGAAATCCAAAGGATGTGGCAGTTTCATTTTATGAGTTCATGAAAGCGCAAGGTTCAGCTGGTGGCTTTAATGGTCCATGGGAATTTTTTGCAAGAATATTTTTAGAAGGAAAAGTTCCTTTTGGATTGTGGAACAAACATGTTCTAGGGTGGTGGAAGCATAAAGATGATTCTAATGTGTTATTTCTGAAATATGAGGACCTGAAAAAGGATTTATCCAGCAGTATTCGGCTAATGTCAGAGTTTCTTGAAAAGTCTGTTTCTGAAGACATAATTAACAAAATCGCTCATCAGTGTACCTTCAAGGAAATGGCAAAGTGCACGTCCAAGTTTAGTGTGGGTGATCTCAAATTTTTACGAAAAGGAGAAATTGGTGACTGGAAGAATTACTTTACACCAGAAATTGAAAAGCGCTTTGAGAGTGAGGTGATGAAGGAGCTTATGGACACAGATCCAGCGGCCTTGCAAGATTACGTTGCGAATTTTCAAACCAGGCATGACGATGTGTTCATTGTGAGTTATCCAAAATCAGGGACCACCTGGATGCGGGAAATATTATGGCAATTGTATAACAATGGAGAAGTAAGTGAAAGGAAAGTATTTGAAAGAGTTCCGTTGTTGGAGCGTGCATTTGACATTAAGGGCCAACCAGGTGTAAGAACTCTCCCCAGTCCTCGCCTCATAAGTAGTCACCTTACTTATGACATCACACCTAAAGGAAAGGGATGCAAGTACATGTACATTGCACGAAATCCAAAGGATGTGGCAGTTTCATTGTATGAGTTCATGAAAGCGCAAGGTTCAGCTGGTGGCTTTGATGGTCCATGGGAATTTTTTGCAAGAATATTTTTGGAAGGAAAAGGTCAGGAGACAACCTCAAATCAGCTGTCTTTCACTCTTTTTGAAATACTCAAGAACCCAGAAATTGAAAACAGACTAGTACAAGAAATTGAAACTGTACTTGGTTCTCGGGAATTTGTGGAATACAGAGACCTTGGAAACCTTCAGTTCCTTGGTCAGACCTTAAAGGAAAGCCTCAGACTTCATCCTCCAGTAGAGGCAACTTCTCGTGAAACAACAAGAGATGGCTACTTTGCTGGGCATTTCCTCCCCAAGGGAACTTCAGTACTCATTTGTTGGTTCGTATTACACCGACTTCCTGAATTTTGGCCAGAACCAAGAAAGTTTGATCCAGAGAGGTTTTCCACAGAAGCCAAGAGTCCAGGCCATGGTCGATCTGTTCCCTATTTTCCCTTTTCTCTTGGTCCTAGAACCTGTATTGGTCAAACATTTGCCCAGTTTGAGGCTCGTGTGCTAATGGCAAGACTGCTACAACAGTTTGAATTGAGTTTGATACCAGGGCAAAATGAGTTGCGTCATGAAGAAAGGCTGACTTTAAGGCCCAAAGGCGGGGTACAATGCATCATTAAGAGAAGAGGCACAGTTTCATGAATAATCCATCAATTGATTTTgtaattgcagggcttgaaataattttcggatagtctccggtcacgatgaccggccaaattcatttttgcttggtcatgtatcgtttctggccggtcaaatgtatatgatgaattactcttttaggggcccataaacccaatatgaaaaattgaaaattactaatgacgatgcatgaattgtaaacaacggctctagttgcatgtcaccaggatttcatatcaaagttccgcaatacacagcgactcgataaataacaactgaaacaactgaacagcaggaaccttaaatttatttcattttcaatacgattgaattttgacaggtcaacatgaccggcaagacgaaagtttgaccggtcaaatccacaatcagtccggacattgtctgttgaccggccattatttcgaaccctgAAttgtgtcattaacaaaatgctggaatatgattggtggttaacagcccttatttatgacctaattggcggtttcaggtccaaactgtccaattacaaacattcataatcggacagctgagcagccaataaaaattaagcacttcatgccactagccaataaacattaactacccagcccacccttgccaatcaaattaatgaaaatctcttacgtaagcagattgacaagtgcagattaaaaacaaacacggatg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q95JD5	Sulfotransferase 1B1 OS=Canis lupus familiaris OX=9615 GN=SULT1B1 PE=1 SV=1
P49888	Sulfotransferase 1E1 OS=Homo sapiens OX=9606 GN=SULT1E1 PE=1 SV=1
O43704	Sulfotransferase 1B1 OS=Homo sapiens OX=9606 GN=SULT1B1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000223 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan
PF00685 all species →	Sulfotransfer_1	Sulfotransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR017972 all species →	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR002401 all species →	Family	Cytochrome P450, E-class, group I	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR000863 all species →	Domain	Sulfotransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11783 all species →	SULFOTRANSFERASE SULT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008146 all species →	Molecular Function	sulfotransferase activity	Interproscan
GO:0051923 all species →	Biological Process	sulfation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0060.g15.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.