Gene detail

Detailed information of amic_s0062.g37.t1 in Acropora microphthalma

Genomic Location: sc0000062_pilon:672848...677097
NR annotation: XP_015747434.1, PREDICTED: 60S ribosomal protein L22-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4R5I3	Large ribosomal subunit protein eL22 OS=Macaca fascicularis OX=9541 GN=RPL22 PE=1 SV=3
P67984	Large ribosomal subunit protein eL22 OS=Mus musculus OX=10090 GN=Rpl22 PE=1 SV=2
P67985	Large ribosomal subunit protein eL22 OS=Sus scrofa OX=9823 GN=RPL22 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008283 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01776 all species →	Ribosomal_L22e	Ribosomal L22e protein family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002671 all species →	Family	Large ribosomal subunit protein eL22	Interproscan
IPR038526 all species →	Homologous_superfamily	Large ribosomal subunit protein eL22 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10064 all species →	60S RIBOSOMAL PROTEIN L22	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02891	RP-L22e, RPL22; large subunit ribosomal protein L22e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.