Detailed information of amic_s0062.g56.t2 in Acropora microphthalma

Genomic Location: sc0000062_pilon:1080913...1135397
NR annotation: XP_044176883.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114951054 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P98167SCO-spondin OS=Bos taurus OX=9913 GN=SSPO PE=2 SV=2
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2
Q8CG65SCO-spondin OS=Mus musculus OX=10090 GN=Sspo PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000019 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF08685
all species →		GONGON domainDomainInterproscan
PF00040
all species →		fn2Fibronectin type II domainDomainInterproscan
PF00092
all species →		VWAvon Willebrand factor type A domainDomainInterproscan
PF07691
all species →		PA14PA14 domainDomainInterproscan
PF00093
all species →		VWCvon Willebrand factor type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR013806
all species →		Homologous_superfamilyKringle-like foldInterproscan
IPR000562
all species →		DomainFibronectin type II domainInterproscan
IPR052065
all species →		FamilyComplement and asymmetry regulatorInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001007
all species →		DomainVWFC domainInterproscan
IPR003582
all species →		DomainShKT domainInterproscan
IPR006558
all species →		DomainLamG-like jellyroll foldInterproscan
IPR012314
all species →		DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR037524
all species →		DomainPA14/GLEYA domainInterproscan
IPR036943
all species →		Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR011658
all species →		DomainPA14 domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906
all species →		PROPERDINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0062.g56.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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