Detailed information of amic_s0063.g114.t3 in Acropora microphthalma

Genomic Location: sc0000063_pilon:2112899...2144179
NR annotation: XP_015758704.1, PREDICTED: uncharacterized protein LOC107337971 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3UP38EF-hand calcium-binding domain-containing protein 4B OS=Mus musculus OX=10090 GN=Cracr2a PE=2 SV=2
Q9BSW2EF-hand calcium-binding domain-containing protein 4B OS=Homo sapiens OX=9606 GN=CRACR2A PE=1 SV=2
Q5RI75Ras and EF-hand domain-containing protein homolog OS=Mus musculus OX=10090 GN=Rasef PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000048 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499
all species →
EF-hand_7EF-hand domain pairDomainInterproscan
PF00071
all species →
RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →
DomainEF-hand domainInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan
IPR001806
all species →
FamilySmall GTPaseInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR018247
all species →
Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR050227
all species →
FamilyRas-related protein RabInterproscan
IPR005225
all species →
DomainSmall GTP-binding protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47977
all species →
RAS-RELATED PROTEIN RABInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0003924
all species →
Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0016192
all species →
Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K17199RASEF, RAB45; Ras and EF-hand domain-containing protein-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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