Gene detail

Detailed information of amic_s0063.g22.t1 in Acropora microphthalma

Genomic Location: sc0000063_pilon:505446...512240
NR annotation: XP_015778328.1, PREDICTED: 60S ribosomal protein L15-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5EAD6	Large ribosomal subunit protein eL15 OS=Bos taurus OX=9913 GN=RPL15 PE=2 SV=3
E2QXF3	Large ribosomal subunit protein eL15 OS=Canis lupus familiaris OX=9615 GN=RPL15 PE=1 SV=1
P61313	Large ribosomal subunit protein eL15 OS=Homo sapiens OX=9606 GN=RPL15 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009011 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00827 all species →	Ribosomal_L15e	Ribosomal L15	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000439 all species →	Family	Large ribosomal subunit protein eL15	Interproscan
IPR020925 all species →	Conserved_site	Large ribosomal subunit protein eL15, conserved site	Interproscan
IPR024794 all species →	Homologous_superfamily	Large ribosomal subunit protein eL15 core domain superfamily	Interproscan
IPR012678 all species →	Homologous_superfamily	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11847 all species →	RIBOSOMAL PROTEIN L15	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02877	RP-L15e, RPL15; large subunit ribosomal protein L15e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.