Detailed information of amic_s0063.g54.t1 in Acropora microphthalma

Genomic Location: sc0000063_pilon:1113951...1149730
NR annotation: XP_044174760.1, PAX-interacting protein 1-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JNA8PAX-interacting protein 1 OS=Bos taurus OX=9913 GN=PAXIP1 PE=2 SV=1
Q6NZQ4PAX-interacting protein 1 OS=Mus musculus OX=10090 GN=Paxip1 PE=1 SV=1
Q6ZW49PAX-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAXIP1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001384 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02841
all species →		GBP_CGuanylate-binding protein, C-terminal domainDomainInterproscan
PF12738
all species →		PTCB-BRCTtwin BRCT domainFamilyInterproscan
PF00533
all species →		BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF16770
all species →		RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan
PF16589
all species →		BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan
PF02263
all species →		GBPGuanylate-binding protein, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420
all species →		Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357
all species →		DomainBRCT domainInterproscan
IPR003191
all species →		DomainGuanylate-binding protein/Atlastin, C-terminalInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR030386
all species →		DomainGB1/RHD3-type guanine nucleotide-binding (G) domainInterproscan
IPR051579
all species →		FamilyDNA Damage Response and Transcriptional RegulatorInterproscan
IPR015894
all species →		DomainGuanylate-binding protein, N-terminalInterproscan
IPR036543
all species →		Homologous_superfamilyGuanylate-binding protein, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23196
all species →		PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0063.g54.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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