Gene detail

Detailed information of amic_s0063.g63.t2 in Acropora microphthalma

Genomic Location: sc0000063_pilon:1293534...1307110
NR annotation: XP_044174767.1, guanylate-binding protein 7-like isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0063.g63.t2

CTGTAAATAAGCACAaatttcaattaaatcaatttcaattacagtattcgattcgaagttcaTTACAGGCCGTAAGAAACGACAGTTGACCACAACCCGACTTAATAATGGCTGCAAATGCAGGCTTTGCGATACCTCTGTGCCTTCCAAACAACTACCAGTGGAATAAACAAACCGGTGAAGTCAGCCGCAGCAGCGAGCTAAGAAATAGTCTTTACGTGGTGGATGAAGCACTTCACCAGTTGAAAAAAATCAAAGGTCCCGTTTGTGTTGTGTCAATTGCCGGTCCTTACCGCAAAGGAAAATCGTACATTCTAAGTAAAGTCTTTGACCAAGGTGAGGTGTTCCCATTGGGCCGATACATGGACCCAGAGACAATGGGAATATGGATGTGGATTGTACCAAAGAAGATAAAGGAGTACATGGAGGAAAAACTGAAAGCAATGCAGGAACGCAACAACAATCTCACCAGAGAGGAATGCGATGCTCTGCTAAAACACCTGAAAGAAGAGAGGTTGGATCCGATCATTGCACTTCTGTATACTGAAGGCGGCTCCAAGGTCAGTTTTGCTGACATTGTTAGCGGTTACTCGACTATTGAAGAAGACTTCAAGAACCAATCGAGAGGAGCAAAGGATGTTTGTGCTCAGGTGTTCTACGAGTTTCACCCGGAACTCCAGAAGAACATGCAAAAGCATATGGCCCTTTTAGAGCGCCTCATAGATTATGACTTAAAGGAGGCGCAACGCAAAGCAGAATTGGCACACATGGAGCAGGAAAGAAAAAGAATTGAGGAGCAAAATAAGCGCATACAAGAAGAACGAGAGACTAAAGAACAAGAGATGAAGCTGCTGCAGAAAAAAATGGAGGAAGACAGAAGACGCTTGGAAGAACAGTTCAGAACTGACATGGAAACTCAAAGAGTGCTTATGCAGGATATGATGACAGCCAATATGAATGAGCTACGTTCAGAGAGGCAGGCGACTATTGAGCAGAACCAAATTCTATTGGCCACCATAGAGATGAAGCTGCTCCAGAAAAAAATGGAGGAAGACAGAAGACGCTTGGAAGAGCAGTTCAGAACTGACATGGAAACTCAAAGAGTGCTTATGCAGGATATGATGACAGCCAATATGGATGAGCAGCGTTCAGAGAGGCAGGCGATTTTTGACCAGAACCAAGTTCTAGTGCACACCATGGAGGAGCAAAATAAACGCATACAAGAAGAACGAAAGACTAAAGAACAAGAGATGAAGCTGCTGCAGGAAAAACGGGACGAAGACAGAAGACGCTGGGAAGAGCAGTTCAGAACTGACATGGAAACTCAAAGAGTGCTTATGCAGGATATGATGACAGCCAATATGGATGAGCTGCGTTCAGAGAACCAGGCGATTACTGACCAGAACCAAACTCTACAGGACACCATCACAAGCATGAACGAGGCTATGGGGAGGCGAACTGGCCAGATGCTAGCGCTTCAGAATCAGATTACTGCACTAGCCAATCCTCCTCCACCTTCCCCACCAAGTGATGATGGTGGATGCGTCATTCTCTAAACTGGAAAATCCAAAACTTTGATGAATAAACCCCAAAAGTGGGGTCACGTTTAAGTAATTCATGTTATTTGCTAGGTGTAAACTGATGCATCAGTTTTTTTTTTCGtttcttgattattccaagtcctttggcctgaaaaatgattccagctccagcgcagttaaatagatgtcagcggtttggggattaaggacaaacattgagaagtcgttaacgagtgttcccgtcgttcaaacaactgcaaacaagtcatgtcatgtcgtagattggacgacaacagttgcgaaatgtaaaaaaaaaaaaacaaaatgacacaaaacacatgcaaagcgtgcaaaactactgtttcattttttcgttgtcaaatatgcaaattataatcgttcttgtcgcggtcgaggtcgtggtttgttaagctTATATGTAAACTCAAAATGACGTGATAAATAGAAGGTGGTGTTACTTTTAAGAGTGATGCGTTCAACCAACGGGAAAGCTGTCCAATAGGTCGACTAACGTATGCTTGCAGTAGTAAATGTAAGTTAAACTTTCGTTAAAATTTATCTTTTCATTATTTTTCCTTCACTTAGTTTTGCATTTAAGCAAAGATAGAAAACTGGACTGATTTGGGAGTGAACAGAATTTGAATTAATCGAAATAGATTTTAGAAACTCAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000346 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02263 all species →	GBP	Guanylate-binding protein, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015894 all species →	Domain	Guanylate-binding protein, N-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR030386 all species →	Domain	GB1/RHD3-type guanine nucleotide-binding (G) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10751 all species →	GUANYLATE BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0063.g63.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.