Detailed information of amic_s0065.g42.t1 in Acropora microphthalma

Genomic Location: sc0000065_pilon:616478...630932
NR annotation: XP_015769665.1, PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5YKK6CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2
Q6ZQ08CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2
A0JP85CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis OX=8364 GN=cnot1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04054Not1CCR4-Not complex component, Not1RepeatInterproscan
PF12842DUF3819CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007196DomainCCR4-Not complex component, Not1, C-terminalInterproscan
IPR040398FamilyCCR4-NOT transcription complex subunit 1Interproscan
IPR024557DomainCCR4-NOT transcription complex subunit 1, domain 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13162CCR4-NOT TRANSCRIPTION COMPLEXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000288Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:0060090Molecular Functionmolecular adaptor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12604CNOT1, NOT1; CCR4-NOT transcription complex subunit 1-Messenger RNA biogenesisko03019deepkoala

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