Detailed information of amic_s0065.g43.t1 in Acropora microphthalma

Genomic Location: sc0000065_pilon:632174...657062
NR annotation: XP_044167139.1, LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5YKK6CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2
Q6ZQ08CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2
A0JP85CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis OX=8364 GN=cnot1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16418CNOT1_HEATCCR4-NOT transcription complex subunit 1 HEAT repeatDomainInterproscan
PF16417CNOT1_TTP_bindCCR4-NOT transcription complex subunit 1 TTP binding domainRepeatInterproscan
PF16415CNOT1_CAF1_bindCCR4-NOT transcription complex subunit 1 CAF1-binding domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032194DomainCCR4-NOT transcription complex subunit 1, HEAT repeatInterproscan
IPR038535Homologous_superfamilyCCR4-NOT subunit 1, TTP binding domain superfamilyInterproscan
IPR032193DomainCCR4-NOT transcription complex subunit 1, TTP binding domainInterproscan
IPR032191DomainCCR4-NOT transcription complex subunit 1, CAF1-binding domainInterproscan
IPR040398FamilyCCR4-NOT transcription complex subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13162CCR4-NOT TRANSCRIPTION COMPLEXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000288Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:0060090Molecular Functionmolecular adaptor activityInterproscan

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