Detailed information of amic_s0066.g4.t1 in Acropora microphthalma

Genomic Location: sc0000066_pilon:80916...90115
NR annotation: XP_029214159.2, cytoplasmic protein NCK1-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P16333SH2/SH3 adapter protein NCK1 OS=Homo sapiens OX=9606 GN=NCK1 PE=1 SV=1
Q99M51SH2/SH3 adapter protein Nck1 OS=Mus musculus OX=10090 GN=Nck1 PE=1 SV=1
O55033Cytoplasmic protein NCK2 OS=Mus musculus OX=10090 GN=Nck2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004263 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018
all species →		SH3_1SH3 domainDomainInterproscan
PF14604
all species →		SH3_9Variant SH3 domainDomainInterproscan
PF00017
all species →		SH2SH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452
all species →		DomainSH3 domainInterproscan
IPR000980
all species →		DomainSH2 domainInterproscan
IPR036860
all species →		Homologous_superfamilySH2 domain superfamilyInterproscan
IPR051184
all species →		FamilyTyrosine-phosphorylated adapter moleculeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19969
all species →		SH2-SH3 ADAPTOR PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0030971
all species →		Molecular Functionreceptor tyrosine kinase bindingInterproscan
GO:0035591
all species →		Molecular Functionsignaling adaptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0066.g4.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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