Detailed information of amic_s0067.g11.t1 in Acropora microphthalma

Genomic Location: sc0000067_pilon:162736...206094
NR annotation: XP_044173142.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114965301 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C8YR32Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1
Q8IVV2Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4
P20693Low affinity immunoglobulin epsilon Fc receptor OS=Mus musculus OX=10090 GN=Fcer2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001653 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan
PF01822
all species →		WSCWSC domainDomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07691
all species →		PA14PA14 domainDomainInterproscan
PF10528
all species →		GLEYAGLEYA domainDomainInterproscan
PF01477
all species →		PLATPLAT/LH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR037524
all species →		DomainPA14/GLEYA domainInterproscan
IPR002889
all species →		DomainCarbohydrate-binding WSCInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR011658
all species →		DomainPA14 domainInterproscan
IPR018871
all species →		DomainGLEYA adhesin domainInterproscan
IPR001024
all species →		DomainPLAT/LH2 domainInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR018378
all species →		Conserved_siteC-type lectin, conserved siteInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR036392
all species →		Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47635
all species →		CUB DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0067.g11.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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