Gene detail

Detailed information of amic_s0067.g2.t2 in Acropora microphthalma

Genomic Location: sc0000067_pilon:24458...38795
NR annotation: XP_044173147.1, cytochrome P450 3A4-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0067.g2.t2

GATAGAGTATACGTTAAGCTTAATTTTCGAACAGAGGGACAAGGAGAGTAAGTTAATCTTTCGGAAACCTTTCATACTCGAAAAAATATCTGGTTCTTGATCACATGCAAACGGCTGGCTCCGTTTTATAATAAGGGAGCAAGAACAGGAGAAGACTTTTGGAATTCTCAAAGCATTTGAAGTTTAGCAAATAGGGAAAAACAGTAAAGATGGCTGATTTTCTGCAAGCGACAACAACGTTCGTGACCGACCACTGGGTCTCCTTTTCAATTGGACTTCTGCTCCTTCTCGTTTACCGATATTGCACAGCGCCATTCACTTTTTTTAAGAAACTTGGAATTCCAGGACCAGAAACTACCCCCTTTTTTGGAAGTACAGCATCTCTGATTTTTAAGCCCAACAAACTTCCAATGCTTCATCTGGATTGGTATAAGAAGTATGGCAAGGTTTTTGGGATTTATTTTTTTCGTGAACCGTTTCTCATGGTAGCTGATCCAGAAATGATCAAGGAGATTCTTGTAAAAGAATTTCCAAAATTTCACGATCGAAAGGCCTTAGCAGATATTCCAAAACCCTACAATCGAATGTTAACTCTGGTACGCGGTCAGAAATGGAAGGACATTCGAAGTATTTTGACACCTACCTTTAGTGCTTCGAAAATTAAACAGATGATTCCCTTCATGAATGAAGCTCTTGATACTTTGCTTGCAAAAGCTGAGAGGATTTCCAAGACAGGGGAAATTGTTGATTTCCACAGGTGGCTTCAGAGCCTAACAATGGAAGTGATTTTGTCAACAGCCTTTGGGGTCAAAGCACAAACGCAAACTGTAGAAAATGATCCCATCACTGAAAGCGCTAGAAAGGCAATGGCTCCTAACCCAGTGGCGGGCCTCCTATTGTTGCTTCCATTTGCAAACCGCCTACTCAAGTACTTTCCAGATATGTTTAACTTTGAGAAGATTGGAAAAGTAGCATCTAACATCATTGCTGAAAGGACCAAACTAAATGGTCACAGCAAAAATCATCGAAAAGACATGCTTCAGTTAATGCTTGACGCAAAAGAAGAAACAGGAAGCGAAAAAATTGATATTGAAGATATTCAAGCACAAACTCTTGTCTTCCTTCTTGCCGGATATGAAACCTCTAGCACCACTCTGGGGTTTGTCTCTTATCATCTCGCTCTTGATACGCAAGTGCAAGACAAACTGAGAGACGAGATCGACCGCTTGTGGCCTGGCGATGAGGAAACGCCGTCTTACGATGTTCTTCATAAAATGGATTATTTAGACATGGTTATAAACGAAGCCCTTAGAATGTATCCTCCAGGGTTTGTACTTCAGAGAGACTGCAATGAGGGCTGCACCGTGAAAGGAGTAAATATACCTAAAGGAATGCCCATCATGATCCCTGTCTATGCGATCCATCATGACCCTAAGATTTGGCCGGAACCAGAAAAGTTTAATCCAGAGAGCACCACTCTGGGGTTTGTCTCTTATCATCTCGCTCTTGATACGCAAGTGCAAGACAAATTGAGAGACGAGATCGACCGCTTGTGGCCTGACGATGAGGAAACGCCGTCTTACGATGTTCTTCATAAAATGGATTATCTAGACATGGTTATAAACGAAGCCCTTAGAATGTATCCTCCAGGGTTTGTACTTCAGAGAGATTGCAATGAGGGCGGCACCGTCAAAGGAGTAAATATACCAAAAGGAATGCCCATCATGATCCCTGTCTATGCGATCCATCATGACCCTAAGATTTGGCCGGAACCAGAAAAGTTTAATCCAGAGAGGTTTACAGAGGCCGAAAAAGCAAATCGCCATCCTTACACCTTCATGCCATTTGGTTACGGTCCACGTAACTGCGTTGGAATGAGATTTGCTTTGTTGGAACTTAAGCTGACGCTTGTGAAGCTGCTGAAAAAGTATAAACTCGAACGCACCGAGAAAACTGCGGTTCCGATGGAGTTTTTGGTTGGTTCCACTCTTAATTGTCCTCCTGGAAAAGTTATGCTGAGGATTTCGTCGCGGGACTGAACTAAGAGCTGTGCGCGTAGCTTTCATAGTGTCAAATACCTCTTTCTTAACCTTGCCATTACGATAAATATCTCGTTAACAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08684	Cytochrome P450 3A4 OS=Homo sapiens OX=9606 GN=CYP3A4 PE=1 SV=4
P24462	Cytochrome P450 3A7 OS=Homo sapiens OX=9606 GN=CYP3A7 PE=1 SV=3
P33268	Cytochrome P450 3A8 OS=Macaca fascicularis OX=9541 GN=CYP3A8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000197 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR050705 all species →	Family	Cytochrome P450 3A	Interproscan
IPR002401 all species →	Family	Cytochrome P450, E-class, group I	Interproscan
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR017972 all species →	Conserved_site	Cytochrome P450, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24302 all species →	CYTOCHROME P450 FAMILY 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0008395 all species →	Molecular Function	steroid hydroxylase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0067.g2.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.