Gene detail

Detailed information of amic_s0067.g61.t1 in Acropora microphthalma

Genomic Location: sc0000067_pilon:751555...763369
NR annotation: XP_029204211.2, mitochondrial glutamate carrier 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amic_s0067.g61.t1

aatattcaatacatagcccattctgccttcggcctcatggactattgattcagagcccattcgggctcgagtaataatttataaataatcaccatttctcaaatctttaattccaagtggcgttttcgttgcattgctgtcgttgctgctttagctccctaatatagtaTACTCTTTATAACTTTAAAAAACTGAATTTTTGGAAAGCAACATTACCGATTCATTTAAACATTACTATATCTGAATTGACTTCTGGCCAATCTTTTCATCCACGTTCTTGCCATGGAATTGTTCTTCGAACTTTTGAATTAACAAGGATCGAGTTTTCAAACTAAAACGTACATTATTTAGCTCCCATGAATCATGCTTCGCAGTGGATCAAATCAAAAAGAGGGAAACGAGGGGTGTCTGGAAAACCCGAATAACGAATAGTGGCGAACAGTTCCAAATAGTGGCTAAAAACAGGTTAAATTATTTTCAGAAAGACCTTTTGTCCTGATAAGTGTCTATGCTTTTTAGCGGGAAAGGCCAATTCCACGATGTTGCGATGTCTGTCCTGTTTGCTACGATTTTCCAATATTCGCCGCCATTCACCACTATTCGAGACTATTCGTGCTATTCGCGACTATTCGTTGTTCGGGTTTTCCAGACACTCGGGAAACGAGACGAAAACAAATTAGCGCTATTCGCATTGACGGGACGAAGAAATCAGGAGTAATAGCGGGGCTTGACCGGTCTACCATTTTCGATCCTCTCCGTGCTCTCCGCCGCGGGGCCACGTTCTGAGTATCTCCCTAGCAAAGTACACTGAAAATAAAGTGTATCTAAAAATGTTAAAACATTTTATGACTTAAAATTATTAATAACAAAGTTATTGCAGGAAAAATGTGATTATGATCTACTTGATATGAATTGGTGAAAGAGCCTGGGCATTGTGACATTTCATTCTTAAGTTTACTGATCAAATTTTTTTTAGATTCAAGGTCTCAATGACACACTGTCAGGTTTTCGTGTTTCTTTCATGTCTATACTTGGATGTTGTTGAACTAAAAACGGTGACAATTTGAAACGTTTTGGAACTTGCTGGAGCCGTCGTAAATTTCTTCACGAAAGACTGATTTAAATTTCTTCGATAATTTTTGAATAATGATTTATTAATAATTATCAGTTGAGTAGAGAATCACAAAGTCTTTTGCCGTTTAACGTAAGTCTCGTTTCAGAAAGTAGCTGGGATAACGAGGAAATGATTCAATTGAGTTTTGCATGACGTTCATTGGTAACACTTTAAAATACTTTTGTAATGTGCTTTCAAGGAAACTCGTATTATCGGGTGGTTGAATCGTTTGTATCCAGAAGAATTATTAAAAATAAAGCTAATTAAATTTTAAACAACGCTTGTCGTCAACGGAACTGAGTCAGCACTGTAAATCTCTCTCCTCTTTCATTGAAGTCAGCCGTGAGTTAACACCAAATAATTTGTACCGTGATATAATGTTTTGTGACCTCTTTGATGCTAATGCAAGATATAAGTTCCTTTTATGTCCTCGAGAGCTGATCTCTAAGAGAGTTTGAAAGGTCATCTCATTCACAGAGGTTCTATCGAGCGATGCCATTGGACAGTATTTAAGAAAACTGTGGAAAGGCATGTATTAACAGAGGCGGGAACACAAGAAGCAAGGCTCTGTGCTTTTCAACATTTTGAAACGCCACTGTTTGGTAACTGCAAAGAATTCAGGCGAAATCCATCCGTTGCATGGAAAAACCCCGCAGCTTTTCAGCTAAACTTATCAATGGAGCAATTGCTGGAGTTGTTGGTGTTTCTTGTACCTTCCCTTTGGACCTCGCAAAAACAAGACTTCAGGATCAGCGAAATCTTGGTCCTCGAAAGCAATACAGAAACCTAATGGACTGCTTATGGAAAGTGGCAAAAGCGGAAGGAGCACGGGGCCTTTACAAAGGCATAGGAGTAAATTTGTTGCTTATCAACCCAGAAAAAGCGATTAAACTTGCTGTTAATGACCAAGTAAGACAGATGTACGGTGGTAAAAGGCGAAGGTTGCCTTTATCAAAAGAAATGATTGCAGGGGGTGCTGCCGGCTTTTGTCAGGTAATAATTACAACACCGATGGAAATGCTGAAAATACAGCTTCAAATGGCAGGCACACAAAATTTGGCCGACTCTCCAATGACGCCCAATACAACGACGGCAGTAGCAGCCGCCAGTTCAAACGTGAGAACATTTGGCACCAAATCAGGTACTTTGCCAAAATCTGCTGCTGAAATAGCTCAAGACGTACTGAGAAGCAAGGGAGTTAAGGGCTTATATAAGGGACTTGGTGCTACATTAGCAAGGGACGTGCCTTTTTCTTGTATTTACTTTCCTCTGTTTTCCTTTTTGCGGCTTGAGTTTCAGCCTGTGGAAGGTCCCAATCCTTCACACAGTTTGTTAGCGGGCTGCGTATCAGGAATGATCGGAAGTCTTGCAGTGACTCCAATGGATGTAGTGAAGACGAGACTTCAGGTTCTAAGGAACGCCCAGGGCGAAGCAGCTTACAGCGGAATTGTAGATTGTGTGCAAAAAACATACACAAACGAAGGAATAATGGCATTCTACAAGGGCGCGGTACCTAGAATGATAGTCATCGCCCCATTATTTGGGATAGCGCAGATGGTGTACTTTCTCGGGGTGGCAGAATGGATGATTGGGTGGGAAGTATGACAAGATGGCGCGCAGGCGACAAACTCCTTCCCTTCACATGGCAAGGGATGGGTAGGCCAGGCCAGGGAAGAAATGGGCTGCCGCAATGAAACCAAATCAAATAAAAGCATTCAGCGATACCTTCTTTCATTGCACGAGAAAGTCAATGTCAACGGCTCAGAAATTTCCAACAAACCGTTAAATAAAAAAATTCTGGCAATTACGTCAGACCGGATTTTGTACATAATCTAACGCTTATTACAGAGACATAAACAAATAAGA

Protein

Uniprot

Uniprot term	Description
Q9DB41	Mitochondrial glutamate carrier 2 OS=Mus musculus OX=10090 GN=Slc25a18 PE=1 SV=4
Q08DK4	Mitochondrial glutamate carrier 1 OS=Bos taurus OX=9913 GN=SLC25A22 PE=2 SV=1
Q9H1K4	Mitochondrial glutamate carrier 2 OS=Homo sapiens OX=9606 GN=SLC25A18 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002067	Family	Mitochondrial carrier protein	Interproscan
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR051028	Family	Mitochondrial Solute Carrier	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR002113	Family	ADP/ATP carrier protein, eukaryotic type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45678	MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005313	Molecular Function	L-glutamate transmembrane transporter activity	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0015183	Molecular Function	L-aspartate transmembrane transporter activity	Interproscan
GO:0015810	Biological Process	aspartate transmembrane transport	Interproscan
GO:0015813	Biological Process	L-glutamate transmembrane transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0043490	Biological Process	malate-aspartate shuttle	Interproscan
GO:0005471	Molecular Function	ATP:ADP antiporter activity	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0140021	Biological Process	mitochondrial ADP transmembrane transport	Interproscan
GO:1990544	Biological Process	mitochondrial ATP transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15107	SLC25A18_22, GC; solute carrier family 25 (mitochondrial glutamate transporter), member 18/22	-	Transporters	ko02000	deepkoala