Gene detail

Detailed information of amic_s0068.g86.t1 in Acropora microphthalma

Genomic Location: sc0000068_pilon:1090837...1098070
NR annotation: XP_029185366.2, protein O-mannose kinase-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0068.g86.t1

CGTAGTTATCAACGCCATTTAAGCGACAGCGAAAGGAGACCTAATAAATTCGAGCCTGTAACGAAAATCATCACTAAACCCTTTAAGTCTTCAGCCTCGTTCCCAGGATTCCCTGAGAGATCCCGAGTTTAAGGTGGGCTTCTCCGTCTTCGTGAACCTCCTTCGGAGCATCGCGTTAGAATCTGGCACAAGAATAGAATGAAGACCATTATTCATTTCGTGTTTGCTAAAGAAAACAAAGCCTTGAATTCAAGGGGAAAAGGTATTTACGTGGTTTCGGAACTGTTTTGAATGGCATGTCATCTCTCCGACTCAAGATCAAGCGCAGATTGAGACCATGGTGTAGACCTATTCAATACTCGTGTACGATCTCTCTGGCCGTATTCACCATTTTTGTATATTTCATAAGCGGGGGAGAACTATTGGGCAGCATTCCCAGATGGGAAGTCCGTTACACAAAGGCTGACTGGAACGTAAGGCTATGTCCATCAAACACGGTTCCTACGCTTGAAAGTTGTGCAAAATGTCCCTTCGGTACGTTTAGCTTCGCAGGATGGAGTGAATGTAAACCTTGGTTAAACTGCTCACAAATTTCTCAGGAAGTTCAATCGACGAGTCGCTTCCATCATGGCGTTACTAAACTCGTGTGGCATGCACGTTGGAATGGTCACCATGTTGTCTTTGTAAACTGTTCAACTCGTGATGCGGATAAGAGGGACCGCTGCTCCAAAGGTTTGTCAAACTTAGAACAGATTCAAGGAGAATTTGCTAGTCGCCTCATCGGAAGATGTCATGAAAAACTGCAGATTGTCACCATTTACTACAAATACGGAACACTGCGATTTCTTAATCATCTTCTCAGACAGGAAGAGCTTTCCAAATACAATACTATACACACAAGAATGCAACTTATAGTGGCTTATGTGAAAGTACTAAAATACTTACACAGTAGTCCAATCGGAGTTCGTGTTATGTGTGATAGTCCGTTTCTAAGCAAATTACTCGATCAGTATTTGATCACAGACGATTTTCAAGTGGTCGTAAATGACGTCGATGGTTTGGAGGAGGTCACTGAGCAAGGAGGGTGTCACAGGAAACCTAATGCGTCAGTCTTACCAAAGCTGGACACAGAGCGACAAGGATGGCCTAAAGAAAACGAAACTTTGCCTTTTCAATTAAGACCGGTGTTCGATGAAAAAATAGACATATGGAAAATACCCTGGGTGGTGGAAAAACTCCTTGGCCGAGTGAAAGGAAGCCGTTTTGTGAAAAGCCATCTACTTGAAATAATGACGAAGTGTCATAGGTTTGATCCACGACAACGGCCGAGTGCTAGGGAGGTGTTAGAAGAATTATTGAAAGTCCAGAGATTAATTTTAATGCACCACGGTAGTTCATGATACTGCTAAttagtatcacccaaatagtggactaatgaaaatcctgcattttgattggctacgctactaggagtctaatagcaatagtcatcgagtagcaaaattcgccggtttttctttggttttttcccctaaacactatttcttcagcttgtaatctgctaactttattattgccttttctgtccaactagttgggtgatactaaaacaattagacctttcgccctcaatagccactgatcaatagcccattcggcttcgcctcatgggctattgacccgtagccctttcgggctatgggtctaattgttaaTTAGCTGCCTCAATATCTCGCTGGTTTGGCCAAACCACTAACAGAAATACTTTGTTCTTTAAAGGAACAGTAGAGGAAAGACAATACCTCCTTATGTCCCATGCATGTTATTTTTCTTCAATCGAATTTTGTATTAGCATCGTAGTACTACATGAAAGTTTTATTGCCAGGCATATTTCatcgatgatcaatgacatcaatgagtaatcgataggtaatcaatgaAAAATCAGCTGATTAGTCATTGATTATTGcaacctcgttcccacggtctctcttctctgcctccattgtcgttgagaaaaTGGAGAAGAGAGACCCTGGGAACGAGGTTGTGATTATTGCCGATGATCAATGAATTATCGATACCTAAGCGAAGACAAAACTTATTATGGCCGATTTATTACTCATTGATGTCATTGATCACTCATGATTGATTGCCTATTGGTTACTTATCTATTACGAATTTCCCGCCAGATTCAGCTATTAATACGGAGAAATACCCTTTTTTTTATTGAAATAATGTTTTCCTGTAGATGAAGTGATATGTTTCCACCACTTCCACAAACTGAACATTTTGTGGCCTATCGATTACTCATCGATTACCCATTGATCATCGGCAATAATCAATGACTAGTCAACTGATTACCCATCCATTACACATTGATATCATTAATGTTATTGATGAGGTTTGCCTGAATATTGGTCTCGTGCCCATGGTTGTGCGGTTGCGCAGCTAATGATTAGAGGGActaaccaatcaagatctcctttcttgaaagtcctgaaacttttcgggcacatttcgggtgtcataattctcgttgtatcttcaaaacaaatgcgtctcgaggcacgaacctttgaagtttttgtaatatttattcgttttgcaaaacatgaaaagaccagcttcatagaataagcaactcggaggtttacgaatggcttttcgggcccgaaaagttttcgggactttcgagaaacgtgccccaggccccagttgtttccaggctggatagcggcattcattggacaaatccactatccagtgtatgggtggaacaaaataatcgagttatctatccactggatggtgatgttttcggtggatagcgtaatccaaccttttaacaaatgagaccagGTGTGTTCCTTATAGTTGCCATGCATTGTGACCAAGCACTTAAGTTGGGTTaaaacaagcaaataaaaaaacaaaacaaaacaaaaacaaaGAGCATCAAGAGGCTACTATTGGGAGGGGGGTGTGGTCCCTTATTGTCATCCTCATCCGGAAGGAACCATTCCTATCAAATGTGATAAAATTAGGGAATGGACAGATGAAAATAAAGTAGAAGCTTTGAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F349	Protein O-mannose kinase OS=Gallus gallus OX=9031 GN=POMK PE=2 SV=1
Q5HZP7	Protein O-mannose kinase OS=Xenopus laevis OX=8355 GN=pomk PE=2 SV=1
Q95JJ0	Protein O-mannose kinase OS=Macaca fascicularis OX=9541 GN=POMK PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002334 (this species only)

Pfam domain

No Pfam domain signature was detected for amic_s0068.g86.t1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR039318 all species →	Family	Protein O-mannose kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22618 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006493 all species →	Biological Process	protein O-linked glycosylation	Interproscan
GO:0016773 all species →	Molecular Function	phosphotransferase activity, alcohol group as acceptor	Interproscan
GO:0019200 all species →	Molecular Function	carbohydrate kinase activity	Interproscan
GO:0046835 all species →	Biological Process	carbohydrate phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0068.g86.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.