Genomic Location: sc0000069_pilon:868410...911718
NR annotation: XP_015760844.1, PREDICTED: cadherin-23-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families
| CDS |
| amic_s0069.g59.t2 |
| Transcript |
| amic_s0069.g59.t2 |
| Protein |
| amic_s0069.g59.t2 |
| UniProt accession | Description |
|---|---|
| Q2PZL6 | Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2 |
| Q6V0I7 | Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2 |
| Q9VW71 | Fat-like cadherin-related tumor suppressor homolog OS=Drosophila melanogaster OX=7227 GN=kug PE=2 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001840 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12947 all species → | EGF_3 | EGF domain | Domain | Interproscan |
| PF00090 all species → | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF00008 all species → | EGF | EGF-like domain | Domain | Interproscan |
| PF19028 all species → | TSP1_spondin | Spondin-like TSP1 domain | Domain | Interproscan |
| PF00028 all species → | Cadherin | Cadherin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002126 all species → | Domain | Cadherin-like | Interproscan |
| IPR015919 all species → | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR000436 all species → | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR000742 all species → | Domain | EGF-like domain | Interproscan |
| IPR018097 all species → | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR000884 all species → | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR024731 all species → | Domain | EGF domain | Interproscan |
| IPR009030 all species → | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR036383 all species → | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR000152 all species → | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR050174 all species → | Family | Protocadherin/Cadherin-related Cell Adhesion | Interproscan |
| IPR001881 all species → | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR044004 all species → | Domain | Spondin-like TSP1 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24028 all species → | CADHERIN-87A | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0007156 all species → | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0005887 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0007155 all species → | Biological Process | cell adhesion | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K16669 | FAT4; protocadherin Fat 4 | - | Cell adhesion molecules | ko04515 | deepkoala |
