Gene detail

Detailed information of amic_s0070.g17.t1 in Acropora microphthalma

Genomic Location: sc0000070_pilon:353998...366345
NR annotation: XP_029197140.1, ribosomal protein S6 kinase alpha-5-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0070.g17.t1

ATGAGCCAGAATGGCTGTGGAGTACCAGAATTGATTCATCATGAGCTTAGAAATGCTAATCTGACGGCACACGAAGATGAAAAAGTTGGATTGGAGAATTTTGAGCTTTTGAAAGTGCTTGGCACCGGAGCATATGGAAAAGTTTTCTTGGTCCGTAAACGAGGTGGTTATTTTTCTGGAAATTTGTACGCAATGAAAGTTCTGAAGAAAGCGACGATCGTGCAGAAGGCGAAGACAGCCGAACATACCCGCACGGAACGACAAGTGTTGGAAGCAGTGAGACGGTGTCCATTTCTAGTGACATTACATTGGGCATTTCAAACGGAATCCAAACTGCATTTGATTATGGATTATGTGAACGGTGGCGAATTGTTCACACACCTCTACCAGCGAGAGAAATTCACCGAAGACGAAGTGCGAATATATATTGGGGAGATCATCATAGCAATCGAGCATCTCCACAGACTCGGCATCATCTACCGTGACATCAAGTTGGAAAACATACTGTTGGACTCAGACGGTCATGTAGTGATCACAGACTTTGGTTTGAGCAAAGAATTTTCAGATCCAAAATCAGGGGAGAGAACATATTCCTTCTGTGGCACAATAGAATACATGGCACCAGAAGTTGTCAAAGGAGGAAGTAGGGGGCATGATAAGGCAGTGGATTGGTGGAGTTTGGGAGTGCTTATGTACGAATTACTGACGGGAGCATCTCCTTTCACAGTAGATGGAGAGAGGAATAGTCAATCTGAAATTTCCAAACGAATTCTTTACAACAGCCCTCCAATGCCACCTGATATCTCCAGAGATGTTATGGACCTGCTTCTCAAATTATTGCAGAAGGACCCAAAAGTTCGACTCGGAGGGAAAGGCGCTCATGAGATAAAAGCTCATCCTTTTTTCAAGACAGTAGACTGGGACTTGTTATCACAAAAGAAAATTGCTGCACCATTTAAACCTCGCATTGGGGATGAATTGGATGTTAGTAATTTTGCAGAAGAGTTCACAGACATGGTGCCGACCTACTCTCCTGCGGCAGTGCCAAAGACAGCTGATAGAATTTTTAAGGGATATTCATTCGTCGCTCCTTCTATAATTTTTGGCGAAAATGAATTTTCCAATCGTCTCATTGGAAACAAACCCTCTGAGCACAGGCCTGCTCCAGGTGCCGTGGATTATGCAGCATTATTTGAGGACTCTCCTTTCTTCCAAAATTATGTAATAAGTGATGAAGTTCTTGGTGATGGAAGTTTCTCAACTTGCAGGAAATGCATTAACATACGAACTCAAAAGGCTTTTGCTGTTAAAGTAGTGAGCAGAAGACGAGATCACATTCGAGAAGAGCAATCATTAAGGATATGTCAAGGTCATCCCAACATTGTCGAACTGAAGGAGGTCTTTCAAGATGATTTTCACACTTACTTAGTCTTGGAATTACTTGGTGGTGGTGAACTGCTTGAGAGAATACGAAAGAAGAAAAATTTTACCGAAGTGGAAGCTAGTAGTATCATTCGTAAATTAGCATCAGCTGTGGAATTCATGCATGGACGAGGTGTGGTACATAGAGACTTGAAACCTGAGAACTTGCTGTTTGTAGACAATTCAGACAATTCGGAAATGAAAATTGTTGATTTTGGTTTTGCAAGACTCAAGCCTGAAAATCAGCCATTGCAGACTCCATGTTTCACAGCAGCTTTTGCAGCACCAGAAGTTATAAGTCAAACAACTATGAGAACTGGATATGATGAGTCATGCGACTTATGGAGTCTTGGAGTTATCATGTACACGATGCTCTCTGGTCAGGTACCATTCCAAAGCAGTCGCAGTTTTAGGTCTTCAGATTTTATAATGCAAAGGATCACGCATGGAGATATCAGATTCGAAGGCCAGCAATGGGAATCCATCTCACCTGGTGCCAAGGATCTCATCAAAGGACTTTTGACAGTGGATCCCACTCAACGTTTGAAAGTGAGAGAAGTTGTTAATCACGAGTGGCTGAGAGGAAGCACATGTCTTCCACATACACCTCTGATGACACCAGGCATTCTTGGGAAAGGACATAAAAGGACTTTTGTTGAGTCAGCACTTAATGTAACATATGATGCTTTCAACAGAGCACACAAAGAAGGGTTTACATTAATGGATGTTCAACAAGCACCCCTTGCTAAACGACGCAAAAAGAACAAAACCACGTCAACAGATAGCAGGTCGACCACGAGCAGTGACCATAGCAACAGTGGGGGCACTTCACCTTTACTTAACCCAAGGTGA

Transcript

amic_s0070.g17.t1

GGGAAATTTGGCAAAATTTTGCGTTTTCGCTCTTGACAGACGTGTTGTGATTCAAACAGCGAAAAAAATGAGCCAGAATGGCTGTGGAGTACCAGAATTGATTCATCATGAGCTTAGAAATGCTAATCTGACGGCACACGAAGATGAAAAAGTTGGATTGGAGAATTTTGAGCTTTTGAAAGTGCTTGGCACCGGAGCATATGGAAAAGTTTTCTTGGTCCGTAAACGAGGTGGTTATTTTTCTGGAAATTTGTACGCAATGAAAGTTCTGAAGAAAGCGACGATCGTGCAGAAGGCGAAGACAGCCGAACATACCCGCACGGAACGACAAGTGTTGGAAGCAGTGAGACGGTGTCCATTTCTAGTGACATTACATTGGGCATTTCAAACGGAATCCAAACTGCATTTGATTATGGATTATGTGAACGGTGGCGAATTGTTCACACACCTCTACCAGCGAGAGAAATTCACCGAAGACGAAGTGCGAATATATATTGGGGAGATCATCATAGCAATCGAGCATCTCCACAGACTCGGCATCATCTACCGTGACATCAAGTTGGAAAACATACTGTTGGACTCAGACGGTCATGTAGTGATCACAGACTTTGGTTTGAGCAAAGAATTTTCAGATCCAAAATCAGGGGAGAGAACATATTCCTTCTGTGGCACAATAGAATACATGGCACCAGAAGTTGTCAAAGGAGGAAGTAGGGGGCATGATAAGGCAGTGGATTGGTGGAGTTTGGGAGTGCTTATGTACGAATTACTGACGGGAGCATCTCCTTTCACAGTAGATGGAGAGAGGAATAGTCAATCTGAAATTTCCAAACGAATTCTTTACAACAGCCCTCCAATGCCACCTGATATCTCCAGAGATGTTATGGACCTGCTTCTCAAATTATTGCAGAAGGACCCAAAAGTTCGACTCGGAGGGAAAGGCGCTCATGAGATAAAAGCTCATCCTTTTTTCAAGACAGTAGACTGGGACTTGTTATCACAAAAGAAAATTGCTGCACCATTTAAACCTCGCATTGGGGATGAATTGGATGTTAGTAATTTTGCAGAAGAGTTCACAGACATGGTGCCGACCTACTCTCCTGCGGCAGTGCCAAAGACAGCTGATAGAATTTTTAAGGGATATTCATTCGTCGCTCCTTCTATAATTTTTGGCGAAAATGAATTTTCCAATCGTCTCATTGGAAACAAACCCTCTGAGCACAGGCCTGCTCCAGGTGCCGTGGATTATGCAGCATTATTTGAGGACTCTCCTTTCTTCCAAAATTATGTAATAAGTGATGAAGTTCTTGGTGATGGAAGTTTCTCAACTTGCAGGAAATGCATTAACATACGAACTCAAAAGGCTTTTGCTGTTAAAGTAGTGAGCAGAAGACGAGATCACATTCGAGAAGAGCAATCATTAAGGATATGTCAAGGTCATCCCAACATTGTCGAACTGAAGGAGGTCTTTCAAGATGATTTTCACACTTACTTAGTCTTGGAATTACTTGGTGGTGGTGAACTGCTTGAGAGAATACGAAAGAAGAAAAATTTTACCGAAGTGGAAGCTAGTAGTATCATTCGTAAATTAGCATCAGCTGTGGAATTCATGCATGGACGAGGTGTGGTACATAGAGACTTGAAACCTGAGAACTTGCTGTTTGTAGACAATTCAGACAATTCGGAAATGAAAATTGTTGATTTTGGTTTTGCAAGACTCAAGCCTGAAAATCAGCCATTGCAGACTCCATGTTTCACAGCAGCTTTTGCAGCACCAGAAGTTATAAGTCAAACAACTATGAGAACTGGATATGATGAGTCATGCGACTTATGGAGTCTTGGAGTTATCATGTACACGATGCTCTCTGGTCAGGTACCATTCCAAAGCAGTCGCAGTTTTAGGTCTTCAGATTTTATAATGCAAAGGATCACGCATGGAGATATCAGATTCGAAGGCCAGCAATGGGAATCCATCTCACCTGGTGCCAAGGATCTCATCAAAGGACTTTTGACAGTGGATCCCACTCAACGTTTGAAAGTGAGAGAAGTTGTTAATCACGAGTGGCTGAGAGGAAGCACATGTCTTCCACATACACCTCTGATGACACCAGGCATTCTTGGGAAAGGACATAAAAGGACTTTTGTTGAGTCAGCACTTAATGTAACATATGATGCTTTCAACAGAGCACACAAAGAAGGGTTTACATTAATGGATGTTCAACAAGCACCCCTTGCTAAACGACGCAAAAAGAACAAAACCACGTCAACAGATAGCAGGTCGACCACGAGCAGTGACCATAGCAACAGTGGGGGCACTTCACCTTTACTTAACCCAAGGTGACATGGGAATTTTTTTTTAATGACAGAATTTCTTAAATTATGTACTACGGTAATAATATTAATTATTAATATTGTAGATATGTGCAATACACTTTAAGTGATATAAGGATAGTTATTAGATGGATTTTTATAATGTAATCTGTGTTCTATCAAATTTTTTCACTGGTTGAAAAATTACACTCAGGAAATCTGCTGCTATGTTTAATAATTTACCTAAAATGAAACACAGCTAGTCCAGCAATAATAATAGTAATCTTGAAGCCTCTTGATATTGGCAATTATGATTAAAATTTTCGTAACCTGGACTTGAATAGTAAGTTGGATGAACTTGAAAAGCCCAATTGGAAACGGAAGGCTTTGAATCAATGAAAGTTAGTATTCTTCAAACAAAGTTAATTTTTCTTAATTTTCACACAGCAGGAAGGTTTGTGTTCAAAATTAAAGAAAAATTTATTTGTCTTCACTGTGGACAGGCCATAAGCAAGAATATGACTGTATTTGTTAGTGGCTTCTTCTTTGGATTAACAATATTAATATCATTGTAGGATTTTTTTTCTTGTTTGGAGCAACTTGCACATTGATTTAATTGATAATTCAAACTTACACAGACTTGAAAAATGAGATAATTCACTGACTATTACATAGATAAAACCTCTGAGATCCAAACTTTTTTTCAGTAATCAATTGGTGATAAAGCTAGGGTCTGTAAAATTAACCTTAAAATCTGTACACAAAAATAACAATGTCAGCAAGTCTCAGAAGTTCAACAGAATTCAAGAGGTGTCCAGATTTTCCTGGTCAAAAATTGTATCTACGTAGACTTTTGTTCTTAATAATTAATTAAGAATGCAGGTAAAAATATTGAACAAACAAGATTCTTCCTCTGAGATCTCCTACTTTATTGAGGAGTTCTCGTCATAATTTACAAAAGCTTGGGAACTTACATTGGGAATTCAATAACTACATGTTCAACAGGGGTCTAAGAGTATTATAATTCTAGGTCACTTGTGAAAATGTGATCAGTTTTGAGTAAAACAATCAACAATTTAACATGAATGGAGGAGAGGCTAATTTCTTTTTAATGACAGTTTTTTTTAATTTGTTAACTTTGTAAAAAAAAGAAAAGAAAAAGAAAGTTGGACTTATCTCATGTAGCATTAATTTTGTAAAATGATGTCTGATGTACATCTTTATGCATTAATATTTTTAGTAATGTAATTACCAACTCTATCAGGTTGTTAAAATAATCATGGACATTTGTTATTATTATTTTGATACAGTTACATTCGCAAACAAGTGAACTACCAACAGAATACTGATCTTGGAAAGCATTCACTTTCTTTAGAAATGTCCCCCTCTTATTTATATGATTCGACTTTCATTTTTTGATGAAGTTGTAATAATTTGGCAATTGTATGCACAGTAGATGAAATTGGATACAGTTTTAAAAAGGTCATTATTTTTTTCCATCACACAAAGGTACAAAGCAATTAGGTAAAGGTAAATGAAAAATGTGAGGATTGTTGATAATTTATCCTGTACTATTAAATTTTTCAATCtttt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75582	Ribosomal protein S6 kinase alpha-5 OS=Homo sapiens OX=9606 GN=RPS6KA5 PE=1 SV=1
Q5F3L1	Ribosomal protein S6 kinase alpha-5 OS=Gallus gallus OX=9031 GN=RPS6KA5 PE=2 SV=1
Q5R4K3	Ribosomal protein S6 kinase alpha-5 OS=Pongo abelii OX=9601 GN=RPS6KA5 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001524 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00433 all species →	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR000961 all species →	Domain	AGC-kinase, C-terminal	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017892 all species →	Domain	Protein kinase, C-terminal	Interproscan
IPR016239 all species →	Family	Ribosomal protein S6 kinase II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24351 all species →	RIBOSOMAL PROTEIN S6 KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0070.g17.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.