Gene detail

Detailed information of amic_s0072.g84.t1 in Acropora microphthalma

Genomic Location: sc0000072_pilon:1023358...1026090
NR annotation: XP_029192811.2, uncharacterized protein LOC114959078 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0072.g84.t1

AGCCTTGGCAAATAATTTGAACCATTATCTCTTACCGCTCGATGTATGTTATCATTGACATACAGGTATTTTCTCAAGTAACTGCAAATCTGAATCCACTTGTACTAGATGCTAAGTCGCAAGAGATAGAAACCATTCTGGATCGATTGAAAACCGAGGCTGGTGTCTCATTTGAAGGTGAAGGAAGGAACTTTACTATAACTGGATCATTGAAGCAAATTAACTTCTGTTATCGACTATTGCTGTCGCTGTTAGCCGAAGAAAAAGAAATCTTGGATAAACTGGAGAGCTGTACTTTTGAGGGTGCAGATGAACTGGCAGGGCAGCGAGTGATAGGGGAGGCTATTTTAGCTGGAGAGAAGAAGAATGCACTGGAAAGCATCGGCACCATTGTTGCAAGGCCTATGGAAGAGAGGCCTTCAATAAAGGTTCAATACCTTGGAAATGTGCGGCAAGAGGGCACTGAACGAATAATGTATCCTCCCATGGCCGATAAAGAGACGTTTCAAGCTAAATCACTTGCTATTACCTTCATAAGGCAACGATATAACAATACTCTACAAAACATCCAGGAGGCATGTCTTGTTGAGTTTAACGAAAAAGGAAGCGACACTGAAGTTACACTTAAGCCAAAATCGTACTGTGATCCCTACCTATACAAAGATGCTTGCCAAGACTTTTCAAAGCTCCTCCAGTCTGCATCCCAGGGTATGGTTACCTGGGAATTGAATTCGAAGTGTGTGAAGAAAGAAGAAATTGTTTCATTGATTCGCCATCTCTTAACCAATTTGCCAGTGATCTTCGACCAATGCAAAGAAAACGGAGCCATGGTTGTTTACGGGGATGCTGCATCGGTCGAACAAGTAAAGTTGCACTTGAAAGAAGCAATAAATGAGCGCAATGATGACGAGCTGAGTTCTGCTTTGGCTGCAGCTCAATTTATGGACCCAGTTGAATCTTCAAGTCTTTCCATAGAGATGTTTTCTCATCGCACTAAGGATGGCATTAATATTTCCTTACGTTATGGAGACATAACTAGTGAGGATGTTGATGCAATCGTGAATCCTGCTAATGACTTTTTGATGCATGGACTTGGACTCGCAAAGTCCATCGTCCATAAAGGTGGATATGAAATCATAAACGAATCAATTAAATTGATGACTGAACGTAGCTACAAGCCGTTAGAGGTTGGTGAGGCAGTCTACACAGGGGCTGGAGACTTGCCTTGCAAATTTGTCATTCATGCTGTCGGCCCAGAATGGCATAAACAGTCAGAAAAGAGAACTCTGATGCTTCTTGACAAGACATGCTTTGAGAGCCTTCATCTTGCTTCAGTTCTTCAGTTATCATCCGTCGCTTTGCCTGCCATAAGTTCTGGTGTCTTTGGCGTTCCAATAAACGTTTGTGCTTTTGCAATGCTTAATGCAATTGAGAGTTTCCTCGCTTACTTAAACAAGCTTAACGAACAAAACAAAGAAGAAGGGGCTaagacaaaggaacgaaaaggaaataatcaaaagaaaaaAATTGACAAAAAACATGACATTATGAAACAACCTGAGAGTCAAGCAAAAAATGACGTAGGCCAAACTTTTAAATCTGAAAAACAAAAGCCACGACTAAGCGATATTCGTGTTGTTCTCATTGATGCGGACGCTATGGATTTTTTCTTGAAAGAGTTTACAGCAAGGTTTCACAGTGATCAAACAAAATTTGTCTATAGCGTTGAAGATGATCAAGTTGCTTAGAAGGTTTACACATTTTAGAGTTACACGTCTGCAAGAGGCCATGGGGAAGGCTGCTCTCTCTCCCGTTAATTGAAGGGGTTAAGAAAAGTGAAATATACTTTAATTTGACCGGTATACAGATTTGTTTACGGGTGACGCAATATTTATATGATAACTTTCTTTTTCTTGGTCGAAGTAAAGGTTCTTTTCTCCTATTCGCAAAATGAGTTTATAATAATCTCGTTACTTAAGTcacaggtgccttaataatctgagaggtagtgacacagcaaacgaactatagaatcagagcaaatatatttgatttgcctgagatgacagcacacgcggaatactcgaaacacacacctttcaaagcgaagtagagtttaaaggccaacctacttgtggtgctgagcccgggaatccagcacgggccacatttattgacagcgagtgctttaaaccactacacGACGCTATACTTCTTGTTTTCGAACTCAAGTATTGGTACCTGCGGGAAAGCCCCGAGTAAATCCTCTTATCAGAGGAAGGAGACACAGACTGTGCTTGTGATAAACAAGAAGTCTGGCGTTTGCTTTTGGCACAAAAAGCTATAGGTGAGAGCGACAAAAGGGTAAGTAGTTCTTGTAAGGAACTATCTGAAGTCACACAGATATAATGAACAAACCTTCAAGAATTCTGAAGTGCGCTGTTTCATACTGTCTTATTCACAAGCAAACGAAGATGGCTATTCTGTCATACGGGCATGTTTTAATAGGCTCAGTTCAAATTCTTGGAAGTTGCAATCTTGCATACTTTATGATAAGCACTTCCACAAAAGGCACTATCACGGTGTAGACAACATTTCCATCGCCATCTCCCCTGTCATTAAATAAATTTGCATGCGCTTCACCTTTTTGTAGGTGAAAGACATAACATTAGACCTGTAGACACTGTTCTATTTCATATTAATTTATTGAATGAATAATGTATAACAAAATGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q97UU4	Uncharacterized protein SSO2899 OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=SSO2899 PE=4 SV=1
Q4J9D2	Uncharacterized protein Saci_1252 OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=Saci_1252 PE=4 SV=1
Q96XY5	Uncharacterized protein STK_23830 OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=STK_23830 PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003767 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01661 all species →	Macro	Macro domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002589 all species →	Domain	Macro domain	Interproscan
IPR052056 all species →	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan
IPR043472 all species →	Homologous_superfamily	Macro domain-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453 all species →	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0010629 all species →	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212 all species →	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289 all species →	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404 all species →	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0072.g84.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.