Gene detail

Detailed information of amic_s0074.g20.t1 in Acropora microphthalma

Genomic Location: sc0000074_pilon:252578...254535
NR annotation: XP_029213844.2, Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8SQG9	Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Oryctolagus cuniculus OX=9986 GN=NHERF2 PE=1 SV=1
Q15599	Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Homo sapiens OX=9606 GN=NHERF2 PE=1 SV=2
Q9JHL1	Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Mus musculus OX=10090 GN=Nherf2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009083 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR051067 all species →	Family	Na+/H+ exchange regulatory cofactor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14191 all species →	PDZ DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016324 all species →	Cellular Component	apical plasma membrane	Interproscan
GO:0043495 all species →	Molecular Function	protein-membrane adaptor activity	Interproscan
GO:0072659 all species →	Biological Process	protein localization to plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0074.g20.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.