Gene detail

Detailed information of amic_s0075.g55.t2 in Acropora microphthalma

Genomic Location: sc0000075_pilon:654798...660912
NR annotation: XP_029212559.1, cytosolic arginine sensor for mTORC1 subunit 1-like isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0V8A3	Cytosolic arginine sensor for mTORC1 subunit 1 OS=Bos taurus OX=9913 GN=CASTOR1 PE=2 SV=1
Q8WTX7	Cytosolic arginine sensor for mTORC1 subunit 1 OS=Homo sapiens OX=9606 GN=CASTOR1 PE=1 SV=1
Q5R9D1	Cytosolic arginine sensor for mTORC1 subunit 1 OS=Pongo abelii OX=9601 GN=CASTOR1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004144 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21389 all species →	CASTOR1_ACT-like	Cytosolic arginine sensor for mTORC1 subunit 1/2, ACT-like	Domain	Interproscan
PF13840 all species →	ACT_7	ACT domain	Domain	Interproscan
PF18700 all species →	Castor1_N	Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051719 all species →	Family	Cytosolic arginine sensor for mTORC1	Interproscan
IPR045865 all species →	Homologous_superfamily	ACT-like domain	Interproscan
IPR026249 all species →	Family	CASTOR family	Interproscan
IPR049479 all species →	Domain	Cytosolic arginine sensor for mTORC1 subunit 1/2, ACT-like	Interproscan
IPR027795 all species →	Domain	CASTOR, ACT domain	Interproscan
IPR040778 all species →	Domain	CASTOR1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31131 all species →	CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE	Interproscan

Gene Ontology

No Gene Ontology signature was detected for amic_s0075.g55.t2. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23081	CASTOR2; cytosolic arginine sensor for mTORC1 subunit 2	-	mTOR signaling pathway	ko04150	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.