Detailed information of amic_s0075.g69.t1 in Acropora microphthalma

Genomic Location: sc0000075_pilon:748364...791297
NR annotation: XP_029212498.2, laminin subunit alpha-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q00174Laminin subunit alpha OS=Drosophila melanogaster OX=7227 GN=LanA PE=1 SV=2
Q61789Laminin subunit alpha-3 OS=Mus musculus OX=10090 GN=Lama3 PE=1 SV=4
O15230Laminin subunit alpha-5 OS=Homo sapiens OX=9606 GN=LAMA5 PE=1 SV=8
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002106 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053
all species →		Laminin_EGFLaminin EGF domainDomainInterproscan
PF02210
all species →		Laminin_G_2Laminin G domainDomainInterproscan
PF00052
all species →		Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00054
all species →		Laminin_G_1Laminin G domainDomainInterproscan
PF00055
all species →		Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049
all species →		DomainLaminin-type EGF domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001791
all species →		DomainLaminin G domainInterproscan
IPR008211
all species →		DomainLaminin, N-terminalInterproscan
IPR000034
all species →		DomainLaminin IVInterproscan
IPR050440
all species →		FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574
all species →		NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009887
all species →		Biological Processanimal organ morphogenesisInterproscan
GO:0009888
all species →		Biological Processtissue developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06240LAMA3_5; laminin, alpha 3/5-Toxoplasmosisko05145deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP