Gene detail

Detailed information of amic_s0076.g43.t1 in Acropora microphthalma

Genomic Location: sc0000076_pilon:823328...829179
NR annotation: XP_044164821.1, uncharacterized protein LOC114962432 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0076.g43.t1

ATGTCTATCAGTGTGGTGACGAAGATCAAGACCCCCTCTAATGAAAATTTGGCTATGGACATCCCTTCCAATGATTTTCCAGCTTATGAAGACAGGGTCCACCACATACCAGCGAATCCAGTCCCTGATTGTGTCAATGACCAAGAAAAGCCTCACAGTGAAGTCAGTGAAGAATTCAATGAAGTACTTGTAGATGATGTTGATGCTTCCAGAATTGAAAACAACGCTTCTGTGAATGGTGGCCATTGTCAGGAACATGTAGCCAAGACCATCCATTCAGTTGATAAAGACAGGGGCCACCAGATACCAGCCAATGAGGTCTCGGAGTATGTCGCTTGCCAAGAGAAGCCTGCTGATGAAGTCAGTGAAGAATCAAATGAAGAAGCTGATCTCACGCTTTCCGGAATTAACCACAACCATTCTGTCGATGATGGCCATTGTCAGGTACATCTGGCCAAGGACATCCACTCCATTGTTCCAGTTGATAAAGACAGGGGCCGCCAGTTACCAGCCAATCAAGACTGTGATAGTAACAAGCAAGAAAGTGATGTTCCAGTTAACGAGAAGATGTCAGATGATTCCTTTAATTCCAGTGAAGCTAGCGAAGAGTGCTGCAGTGTACCTGGCAAGAACAAAAAACACCAGTCATTTGAACAATGGAAGGCAAAGGTAGAGGAGGAAGAGAGGTGCTCTTTTATAAAAACAACTGGGATGAAGGGTCATGTGCAGTATTACCAATGTAACCGAGGAGGAGTTTACAAACCAAAGGGAACTGGAAAAAGGCATTTAAAATCACAAGGTACATGCAAGATACAGCACAACTGTACAGCAACCCTCAAAGCAACAACCACTAAAGATGGCAAAATTACAGTCGACCTATGCCTTACCCATCATGGCCACCAGAAAGACCTGCAACATACATGGTTGCCAAAACAGAAAAAGGAGGAAATGGCTGCATTATTGCAGCAAGGAGTTTCTAAGGACAAAATACTTGGGGACATCAGAGAGCATGGGATACAAGGGGAGTCATTTAAACGCTATCACCTCACTGACAGGAAAGACCTGTCCAACATCTCAAGAGCTTTTGGATTGGGGGAGATCCAAAGGTCTGAAAATGACCAAGAAAGTGTTCGGGCCTGGATTGAAGAGTGGCAGGATAGTGAGAACAACCCAGTACTGTTTTACAAGTTGCAGGGGGAGCAAGTCCCAGAAGATCTTGATCTACTTCAGGAAGACTTCTTCATAGTCATCCAGACCCCCTTCCAGAAGGCAATGGCCCAAAAGTTTGCTTCCAAAGGTGTTTGTGTTGACTCAACACATGGAACTACAGGATATGACTTTCTGCTAACCACAGTTATGGTTACTGACGAATGTCGAGAAGGGCTGCCTGTGGCTTGGTGTCTTTCAAACCATGAAGATTTCACTCATATGTGTCTTTTCTTCAAATTATTGAGAGAAAACTGTGGTCAGTTATCACCTCATTGGGTAATGAGTGATACCGCAAGCCAGTTTTATAATGCCTGGGTGGCTGTTATGGGGGGCACACCAATTAGGCTGATCTGCATTTGGCATGTAGACAGAGCTTGGAAACAGGAACTCCGGGCTAAAGTTAAAGACAGTGAGATGGCTGAGGACATTTACAAAATGCTCAGAACTGTTATGCAAGCAACAACTGTACCTGAGTTTAAAACCCTCCTGTGCAAGCTTGAGGAGTGCCTCCCTTCCATTAGTGCTGAGTTTGACACCTACTTTGAAAGAGAGTGGCTTAGGAAGAAAGAAATGTGGGCCTATTGCTACCGTGTTGGCTTAGGGATAAACACCAACATGATTGTGGAAGCCTTTCACAGAGTTTTTAAATACAACTATTTGAAAGGAAAGTGCAACAAGAGGGTAGACAACTGCTTGCTGAACTTACTAAAATTTTTAAGGGACAAATACTTTGAAAGACTCATAAAACTGACAAAGGGCAAATGCAACTACAAAATGAGAGTGATACAAGACAGGCATAAGAAGAGCAAAGGGTTGAGAGAAGAGATGATAACCAAAGTGGACAACTGCAAGTGGTCTGTGCAATCTGATGACAATCAAAGTGTATACACTGTGACTAAAGAAATGGAAGTATGTAGGGACCCGAGTTGTGATTTGAAATGCCTTGAATGCAACATCTGCATTCATCAGTATATGTGCAGCTGTCCGGATAGCCTCATTCAAAATACCATCTGCAAGCATGTCCACCTCGTTGAAACAGTTATCTCAACTAAAGCAACCTTGGCAGAACTGTCTTGTGAGATTGAGCCCACAGACACCTTGGATGATAAACGATCAAAGTATGTAGATGAAGAATTGCATGTTCTGCACGAACATGCAATTAAGACCAACAGCCTTAGTGACACTGGCACACATGGAGAAAACGTAAAAGGAAAACAGCTTGCCCTGTTATCTCAAGTCGAGACTTGA

Transcript

amic_s0076.g43.t1

ATGAATGTTGGCTTCCTCCAACAAGGAGTGTGGCAAGAACACGCCTAACCCAAAACACAGTACCAAGACAAGTGACAGACCCCTTCACCCTTAAGTTTCTCCCTCCAGAAAACCAACTTCTGAAGTGGAAAGATGACATCGCCCGCAAGAATCAGCATATGAAAGGAACATTTGTATATGCTGAGAATGCACAAGGCTGCTTCGATATTTCCTCATTGCAAACTATGCTCAAGCTTAACAGAGCCAAATCAATTAAGGCTGCAGTTCAGAAAGAGATTAAATGGTTTGCAGCTCCATATGACATTCCGGCAACAGTACACCACCCTCCTGCACCATCCATTGAGCAATTTAAGGATTTGTTATACTCAGTAAGGTATGACAAAGTGATTTCACCCTACGATATGTCCCCTAATGAGCTGTCTACAATTTGCCTAAACCGGTGGCTTTCCTGTGACCCCATTAGATGGCTAATGAAATCCCTAAATGGATCACAGTCCCACACATATTGTCTCTATCTTAATGAATTCAGGGGAGATCCATCATCACTCAAATGCTTTGTAAACATATTGTCTCTATCTTAATGAATTCAGGGGAGATCCATCATCACTCAAATGCTTTGTAAACAGTGCAACAAAGCCTGACAGGTTCCTGTTTGCAGTCAATGTTGGTCGTTACTCTAATGGTGACACTTTCATTGGTAGTGATCTTCAAAGGGGTTGCCATTGGACAATGTGCCTTGTGGACATTGACAGTAGGGAGATCATTTATGGTGACTCATTGGGATGGCCTGTTCCTCATGGGCTCATTGACAAGGTTTACTCATTCATCAGGTTGGCTTGCCGTGCTGACAGGGATACATTTTCAGTGGTTCTTTGTCATGCTCCCCACAGTGTGAATTCAAGAACTGGAACCCATGATTGTAATTCTGCATGTGCACAACTCTATCCTTTTCAAACATGCAGCAGTATTTGTGGTATTGTTGTGATGGTAATGTCAGCAATTGCTTGCCAGAACCTCCCATTATTTAAACTGATGTCCACTACATGCATCAGGCAAGGGAATACCAATCAACCACCACATATTTATCTCCAGAAGCCTTCACAATTTAATGCCTATTTACGTAGAGTCATTGCATCCTGGGTAGCTGAAAATGCTGTTAGCATAGAATATGTTGTACCACAGTCTATTCAACTGCCTTTACAATCCTTAAACACTCCTAATATGAAGAAAGATGTCTATCAGTGTGGTGACGAAGATCAAGACCCCCTCTAATGAAAATTTGGCTATGGACATCCCTTCCAATGATTTTCCAGCTTATGAAGACAGGGTCCACCACATACCAGCGAATCCAGTCCCTGATTGTGTCAATGACCAAGAAAAGCCTCACAGTGAAGTCAGTGAAGAATTCAATGAAGTACTTGTAGATGATGTTGATGCTTCCAGAATTGAAAACAACGCTTCTGTGAATGGTGGCCATTGTCAGGAACATGTAGCCAAGACCATCCATTCAGTTGATAAAGACAGGGGCCACCAGATACCAGCCAATGAGGTCTCGGAGTATGTCGCTTGCCAAGAGAAGCCTGCTGATGAAGTCAGTGAAGAATCAAATGAAGAAGCTGATCTCACGCTTTCCGGAATTAACCACAACCATTCTGTCGATGATGGCCATTGTCAGGTACATCTGGCCAAGGACATCCACTCCATTGTTCCAGTTGATAAAGACAGGGGCCGCCAGTTACCAGCCAATCAAGACTGTGATAGTAACAAGCAAGAAAGTGATGTTCCAGTTAACGAGAAGATGTCAGATGATTCCTTTAATTCCAGTGAAGCTAGCGAAGAGTGCTGCAGTGTACCTGGCAAGAACAAAAAACACCAGTCATTTGAACAATGGAAGGCAAAGGTAGAGGAGGAAGAGAGGTGCTCTTTTATAAAAACAACTGGGATGAAGGGTCATGTGCAGTATTACCAATGTAACCGAGGAGGAGTTTACAAACCAAAGGGAACTGGAAAAAGGCATTTAAAATCACAAGGTACATGCAAGATACAGCACAACTGTACAGCAACCCTCAAAGCAACAACCACTAAAGATGGCAAAATTACAGTCGACCTATGCCTTACCCATCATGGCCACCAGAAAGACCTGCAACATACATGGTTGCCAAAACAGAAAAAGGAGGAAATGGCTGCATTATTGCAGCAAGGAGTTTCTAAGGACAAAATACTTGGGGACATCAGAGAGCATGGGATACAAGGGGAGTCATTTAAACGCTATCACCTCACTGACAGGAAAGACCTGTCCAACATCTCAAGAGCTTTTGGATTGGGGGAGATCCAAAGGTCTGAAAATGACCAAGAAAGTGTTCGGGCCTGGATTGAAGAGTGGCAGGATAGTGAGAACAACCCAGTACTGTTTTACAAGTTGCAGGGGGAGCAAGTCCCAGAAGATCTTGATCTACTTCAGGAAGACTTCTTCATAGTCATCCAGACCCCCTTCCAGAAGGCAATGGCCCAAAAGTTTGCTTCCAAAGGTGTTTGTGTTGACTCAACACATGGAACTACAGGATATGACTTTCTGCTAACCACAGTTATGGTTACTGACGAATGTCGAGAAGGGCTGCCTGTGGCTTGGTGTCTTTCAAACCATGAAGATTTCACTCATATGTGTCTTTTCTTCAAATTATTGAGAGAAAACTGTGGTCAGTTATCACCTCATTGGGTAATGAGTGATACCGCAAGCCAGTTTTATAATGCCTGGGTGGCTGTTATGGGGGGCACACCAATTAGGCTGATCTGCATTTGGCATGTAGACAGAGCTTGGAAACAGGAACTCCGGGCTAAAGTTAAAGACAGTGAGATGGCTGAGGACATTTACAAAATGCTCAGAACTGTTATGCAAGCAACAACTGTACCTGAGTTTAAAACCCTCCTGTGCAAGCTTGAGGAGTGCCTCCCTTCCATTAGTGCTGAGTTTGACACCTACTTTGAAAGAGAGTGGCTTAGGAAGAAAGAAATGTGGGCCTATTGCTACCGTGTTGGCTTAGGGATAAACACCAACATGATTGTGGAAGCCTTTCACAGAGTTTTTAAATACAACTATTTGAAAGGAAAGTGCAACAAGAGGGTAGACAACTGCTTGCTGAACTTACTAAAATTTTTAAGGGACAAATACTTTGAAAGACTCATAAAACTGACAAAGGGCAAATGCAACTACAAAATGAGAGTGATACAAGACAGGCATAAGAAGAGCAAAGGGTTGAGAGAAGAGATGATAACCAAAGTGGACAACTGCAAGTGGTCTGTGCAATCTGATGACAATCAAAGTGTATACACTGTGACTAAAGAAATGGAAGTATGTAGGGACCCGAGTTGTGATTTGAAATGCCTTGAATGCAACATCTGCATTCATCAGTATATGTGCAGCTGTCCGGATAGCCTCATTCAAAATACCATCTGCAAGCATGTCCACCTCGTTGAAACAGTTATCTCAACTAAAGCAACCTTGGCAGAACTGTCTTGTGAGATTGAGCCCACAGACACCTTGGATGATAAACGATCAAAGTATGTAGATGAAGAATTGCATGTTCTGCACGAACATGCAATTAAGACCAACAGCCTTAGTGACACTGGCACACATGGAGAAAACGTAAAAGGAAAACAGCTTGCCCTGTTATCTCAAGTCGAGACTTGAGACATGGTCAAGAAGTCAATGGAAAGTCTGCAAACTGCCTGGCGATGTGAGACCTGTAAAGTTTCCTCATACGCCAACATGATAATGTGCGAGGGCTGCTGCGGCTGGCATCACTGGACTTGTGCCAAGATAGCTACCACTTCTGAAGAATGGTACTGTGTAGTTTGCTCCAGGAAAGGGAATGGAAGACTATAAGAGAACTGACACTTCTGTCCTCATTCATTTTCGAATACACTCTATCTCAAACCTTCAGTCAAACAAATTAGCACTAGTCATACTACATAGCAAGATGTCTGCAACAGATGTAAGATAGGAAGAATGTAATGACCCTTAAGATGTGTTTCACTGGAAATAAAATTAATGTGACAACAAGATGCACAATTAACTACTATTATATACATGTAAGAGAACTGCCAATTCAGTGGTACATGTATAAGAAGGGAAAGTATGTCCTTCCCATCAGAGATAATACACATAGTACCATAATATATGCATAAATTTGGCCAATGTCAAGTGTAAGTTGTCCACAGACGTCTGAGATTGATAGTACATGAACTAAGTTGCAGGTGACATAAATTACTCACCAGTCTCACAGATATGGTTTGTATTATGTTGTTGTCACTAAGGGAGGGGGGAACCCCCTGGCTACGCCCCTGTATTCCTCTACTTTTTAAAAGGGCTTATAGTCAACATTATTAAAGTCATCTTTGGCAT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000415 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10551 all species →	MULE	MULE transposase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018289 all species →	Domain	MULE transposase domain	Interproscan
IPR007527 all species →	Domain	Zinc finger, SWIM-type	Interproscan
IPR052797 all species →	Family	Regulatory Factors in Gene Expression and Cell Death	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33936 all species →	PROTEIN CBG17840	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17604	ZSWIM3; zinc finger SWIM domain-containing protein 3	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.