Detailed information of amic_s0078.g22.t1 in Acropora microphthalma

Genomic Location: sc0000078_pilon:790626...799641
NR annotation: XP_015773525.1, PREDICTED: uncharacterized protein LOC107351730 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5D1E8Endoribonuclease ZC3H12A OS=Homo sapiens OX=9606 GN=ZC3H12A PE=1 SV=1
A0JPN4Endoribonuclease ZC3H12A OS=Rattus norvegicus OX=10116 GN=Zc3h12a PE=2 SV=1
Q5D1E7Endoribonuclease ZC3H12A OS=Mus musculus OX=10090 GN=Zc3h12a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001621 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11977
all species →		RNase_Zc3h12aZc3h12a-like Ribonuclease NYN domainDomainInterproscan
PF18039
all species →		UBA_6UBA-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021869
all species →		DomainRibonuclease Zc3h12a-like, NYN domainInterproscan
IPR051101
all species →		FamilyZC3H12/N4BP1 Ribonuclease and RegulatorInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR040546
all species →		DomainRege-1, UBA-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12876
all species →		N4BP1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0004521
all species →		Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0036464
all species →		Cellular Componentcytoplasmic ribonucleoprotein granuleInterproscan
GO:0090502
all species →		Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0078.g22.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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