Gene detail

Detailed information of amic_s0079.g7.t1 in Acropora microphthalma

Genomic Location: sc0000079_pilon:211666...215529
NR annotation: XP_015748716.1, PREDICTED: solute carrier family 12 member 2-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P55015	Solute carrier family 12 member 1 OS=Oryctolagus cuniculus OX=9986 GN=SLC12A1 PE=2 SV=1
Q13621	Solute carrier family 12 member 1 OS=Homo sapiens OX=9606 GN=SLC12A1 PE=1 SV=2
P55016	Solute carrier family 12 member 1 OS=Rattus norvegicus OX=10116 GN=Slc12a1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001358 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00324 all species →	AA_permease	Amino acid permease	Domain	Interproscan
PF08403 all species →	AA_permease_N	Amino acid permease N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004842 all species →	Family	SLC12A transporter family	Interproscan
IPR004841 all species →	Domain	Amino acid permease/ SLC12A domain	Interproscan
IPR013612 all species →	Domain	Amino acid permease, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11827 all species →	SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0006884 all species →	Biological Process	cell volume homeostasis	Interproscan
GO:0008511 all species →	Molecular Function	sodium:potassium:chloride symporter activity	Interproscan
GO:0015377 all species →	Molecular Function	chloride:monoatomic cation symporter activity	Interproscan
GO:0015379 all species →	Molecular Function	potassium:chloride symporter activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0035725 all species →	Biological Process	sodium ion transmembrane transport	Interproscan
GO:0055064 all species →	Biological Process	chloride ion homeostasis	Interproscan
GO:0055075 all species →	Biological Process	potassium ion homeostasis	Interproscan
GO:0055078 all species →	Biological Process	sodium ion homeostasis	Interproscan
GO:1902476 all species →	Biological Process	chloride transmembrane transport	Interproscan
GO:1990573 all species →	Biological Process	potassium ion import across plasma membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0079.g7.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.