Detailed information of amic_s0079.g74.t1 in Acropora microphthalma

Genomic Location: sc0000079_pilon:1208818...1212391
NR annotation: XP_020602344.1, collagen alpha-3(IX) chain-like [Orbicella faveolata]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010953 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050632
all species →		FamilyNematode Cuticular CollagenInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24637
all species →		COLLAGENInterproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s0079.g74.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0079.g74.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP