Gene detail

Detailed information of amic_s0080.g35.t1 in Acropora microphthalma

Genomic Location: sc0000080_pilon:674963...691124
NR annotation: XP_044172441.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114952104 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amic_s0080.g35.t1

ACATATCCCTTTAATGGCGTTTGTGACCCGCATCTGTTTTTCCTATTGGTCAAATTTAATTTCTCTTTGCTCTTTATATTTAGGTGGAAAAGTGATACTTGCTGGCACTGTGATGGAATCTGGAATAAGTCTGTTGCACGCGTACGCGCGTTGTGATGGTGATTCGTTAGCACTGTTGATCAAATCGAACATGTCGCTTCTTAATGACGCAGTTCTTATAAGCATTGTGCAACCGTCTCTGCATAGATGATACTGTAAGCGGGTAAATGTCAATTGCTCTTCAGCTCTGGCCCCGCGAGCATGACCCTGTTAGGCGAGAAACCAATTCAGGATGATAATCGGATGATAAGTATTCACAAAACTAGCTGTAAGATGGAGCAAGAAAGAAAAGTTATTCTGAGCTGGATTATCCTGATCTTTTCATCCCCGACCACAGGACAACAAATACAATCTACTGCGTCCATCCCTGGTTCCACCACAATTTCCCCAACCACCGGACCACAAAGACCAAGTGCTCCTCCTGCTAATGTCAGTGGACACAATACAAGTTCCACCAGTATTTTTGTTCAGTGGGACCAAGTTCCGGTTGCTCATCAAAATGGTGCTATATTGTATTACACAGTTACCTACAGAGCTTTACCCAGTGGTTCTATACAAACAAATAATGTGACTGCGCAAGCAAATCAAATGACATTGACTGGTCTAAATAAATACACCAACTACAGCATCACAGTGTTTGCCTCTACTAGCAGAGGAGCTGGAAATGTCAGTGCACCTCTCTTTATTGTAACAGATGAAGACCGACCAAGTGCTCCTCCTGCTAATGTCAATGGGTACAACACAAGCTCCACCAGTATTTTTGTTCAGTGGGACCAAGTTCCAGCTGCAGATCAAAATGGTGTCATATTGTATTACACAATTACCCACAGCTCGTACTGTAGTGGTGGTTTTTCAACAGTGATTGTGGCTGCACCAACAACTCAAACGACATTGACCGGTCTTAATCAAGGCACCCTCTACGGGATATCTGTGTTTGCGTCTACCATAAAAGGGGGTGGGAGTTCCTTCTATATCGATATACAAACAGAATGTTCTAACCACACATTTCTCAACGAGTCGAACAGAGCAGTGACGCATGCAGGCAGAAGCCTTGGTAACCTCTCCGATTCACATTTGTCTGGTTGGTATCGATTTAGTGGAGAGGCTGGAACACAAATGGCAGAAGTATGTCCAAGGATGTATTCCTGCAGTACCAACTCGTCCGGCTGGCTCAATGGCACTCATCCATCAGTGGCCGAGGGAATTGTGGAACGAAAAGTCTGTTTTTCGCAACGCGCGTCACAGTTTCTCAAGGATTGCTGCTACCATTCAAAAAACATCGGCGTGCGAAACTGTGGAGCATTTTATGTTTACCGCCTTGATCCTCCCGACTACTACTCACGTTACTGTGGTAATGGATTTCCACAAGCACCAGAATGTTCAAACTATAAATTCTTAAATGATTCCAGTAGAGCAGTAACATTTAACCATACTGTCTTGATGAATTGCAATGACACTACCAAACTGCATGGCTGGTACCGTTTTGGTGGAGAGGCTGGAACTCAAATGGCTGATACTTGTGTTAAATGGCGTCACTGTGGTGCGTTGTATCCGGGATGGCTCAGTGGAGGACATCCCTCCGTGTCAGATGGCGCTGTTCTACGTAAAGTGTGTTTTACAGAATACTGGGGCAGCTGCTGTTATTCTTCAACCTTCATCAGTGTTCGCAACTGCAATGAATTTTACGTTTATAAACTGTCACCTTTCTATCGGTCGCATTCTTATAATTGTCCATTCCGCTATTGCTCTAACAGTGGGTTTAAGCTGCCAACAACTTCAACTACAGGGAATTCGTCGACGGCGGACGATTGTCTTGTACTAATTGTAAATGCAATATCAGACGAGAGTAGTCAAATCAATTCCAAACACTACTCAGGGCAATTTCATGGTTACGATAGCGTCTTATCCCGTTTCATGTTTTGGGCAGTCCAGTCCTAGATTCACGTTTCCTCCCGCCGAATCGAAGCGTACAGGTTTCTCTTACGAGTTCCTATAAATAACCTAAGGAACG

Protein

Uniprot

Uniprot term	Description
P25291	Pancreatic secretory granule membrane major glycoprotein GP2 OS=Canis lupus familiaris OX=9615 GN=GP2 PE=1 SV=1
Q9D733	Pancreatic secretory granule membrane major glycoprotein GP2 OS=Mus musculus OX=10090 GN=Gp2 PE=1 SV=3
P48733	Uromodulin OS=Bos taurus OX=9913 GN=UMOD PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan