Genomic Location: sc0000080_pilon:55606...79754
NR annotation: XP_029188606.2, cold shock domain-containing protein E1-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families
| CDS |
| amic_s0080.g4.t1 |
| Transcript |
| amic_s0080.g4.t1 |
| Protein |
| amic_s0080.g4.t1 |
| UniProt accession | Description |
|---|---|
| P18395 | Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1 |
| Q91W50 | Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 |
| O75534 | Cold shock domain-containing protein E1 OS=Homo sapiens OX=9606 GN=CSDE1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003220 (this species only) |
| Transcription factor family | CSD · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00313 all species → | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
| PF12901 all species → | SUZ-C | SUZ-C motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002059 all species → | Domain | Cold-shock protein, DNA-binding | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR019844 all species → | Domain | Cold-shock (CSD) domain | Interproscan |
| IPR024642 all species → | Domain | SUZ-C domain | Interproscan |
| IPR011129 all species → | Domain | Cold shock domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12913 all species → | UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
amic_s0080.g4.t1.
