Detailed information of amic_s0081.g33.t1 in Acropora microphthalma

Genomic Location: sc0000081_pilon:345580...350025
NR annotation: XP_015768590.1, PREDICTED: N-myc proto-oncogene protein-like isoform X4 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q90341Transcriptional regulator Myc-1 OS=Cyprinus carpio OX=7962 GN=myca PE=3 SV=1
P18444N-myc proto-oncogene protein OS=Gallus gallus OX=9031 GN=MYCN PE=3 SV=1
P49709Transcriptional regulator Myc OS=Carassius auratus OX=7957 GN=myc PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000933 (this species only) · gene tree & orthology
Transcription factor familybHLH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010
all species →		HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002418
all species →		FamilyTranscription regulator MycInterproscan
IPR050433
all species →		FamilyMyc family transcription factorsInterproscan
IPR011598
all species →		DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638
all species →		Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45851
all species →		MYC PROTO-ONCOGENEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0081.g33.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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