Detailed information of amic_s0082.g14.t2 in Acropora microphthalma

Genomic Location: sc0000082_pilon:212326...228991
NR annotation: XP_044169550.1, transcription termination factor 1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A1U8QVN4Myb-like transcriptional regulator basR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=basR PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001368 (this species only)
Transcription factor familyMYB · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13921
all species →		Myb_DNA-bind_6Myb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005
all species →		DomainSANT/Myb domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR053078
all species →		FamilyTranscription Termination Factor 1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46760
all species →		TRANSCRIPTION TERMINATION FACTOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0006363
all species →		Biological Processtermination of RNA polymerase I transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0082.g14.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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