Gene detail

Detailed information of amic_s0082.g19.t1 in Acropora microphthalma

Genomic Location: sc0000082_pilon:258536...266866
NR annotation: XP_044169557.1, uridine-cytidine kinase 2-A-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0082.g19.t1

GAGTTCGAAAATAATAGGGAAGGAAAGCCATATCCAGAGATTTTCTGGTGGGTCAAGTGGCTTTTAGACAGCTGCTTTCCCTCAAGCTGACTGTTTCCTGGGCTAAGTAAATTTTCCTCCCTGCCCTCCCTAAGGCAAACGTTGTCAGTACCGCCTCCGACAAGATGGCTTCGGTCACAGACTTAATACAAATGAGAAGGGATATGATAAAAGACACTCCTCCCAAACCGTTTCTCATTGGAGTGGCTGGTGGATCAGCTTCTGGAAAGTCTACAGTTTGTGCAAAAATAATGGAACAGTTGGGACAAGAAGGTGTAGAAACAAACAAAAGACGAGTTGTAATTGTCAGCCAAGAGAGCTTTTACAAGGAACTAAGCAAGGATGAAGCTGAGGTTGCAAGGAAAGGAAATTTTAATTTTGATCATCCAGATGCCTTTGATTCTGATAAGACTCTTGAAACATTGCAAAAAATAAAAGCAGCAGAGATTGTTGAGATTCCAGTGTATGATTCTGTCAATGCTACAGGGAAATCAAGATCCATCTCTATATACCCAGCTGACGTGATCATGTTTGAAGGCATCTTGACACTGTACTCCAAAGAAATACGAGATATGCTGGATATGAAGCTTTTTGTGGATTCAGACAGTGATACCAGGTTGTCAAGAAGAGTTATACGAGACACTCAAGAGCGAGGAAGAGATCTTGAACAAGTTTTAGCTACATACACAAATTTTGTCAAACCAGCATTTGAGGAGTTTTGTCTTCCTACAAAAAAGTATGCTGATGTGATAATACCAAGGGGATCAGAAAATACAGTTGCAATCGGTCTCATTGTCCAGCACATCAAAGATATTTTGAGTGGAAACACGACTAGTGAAATTGATGGCGCAATAATTGATTCTTCAACGCGGCAAAGACACCACTCTGATTCAAGTATGATTTCATCCAGACCACACTGAAGATTTGAATAACCAGGGCTCTGCAAATTCTGCTGAAATTACCTCCTTCACCTGCACCTTGtaaaatgatataataattattaatattgtttcttaacattattgataatgtattaatgataataataattaatgttattattaattcatatcaataacaatactataattatcaacattaataataaGTTATTAATGGTTTGTTTGGATTCCTCCATTACTTACATTTATTGGTATGTCAAACAAAATAAATGCAATAGAGTGAAAGCTAAAAGTAACCATTTTGATTTAATGTCACATCTAAAGGCAAGTTAAATCAAAGATTTACTTGATATGTGAGACTAAAATTAATAATAATTATTTAAGATTTCCTTACTACTAATTATTATTGTAACTTTATCTCTTGTTCAAAAAAAAGTATAATTACCACATTCTGTTAACATTAAAGTAAAAGGGTTTGTGATAAAGTAAAGAGTGATGCACAATAATTTCTTTACCACTTTAATCACTTTGTGTAGGAAAAATGGCTAACCTGCACATTGAGTTATTTTTTTTTGTAAAATATACCCTTGCTCCTTTTCAAAACACATTGCATTTTTTTAATGTAATCTTTTCTAAAATCTTCAAAACTTAGGAAAAATGAAGCATCAATTAAAAATTATTGATGCTTCATGTGTGTTTCGTGACCAAGTCAGACTGGGTGTGGCTCTTTTCCTGATTTGATAGTGCAACTTAATTTGCATGCATGTTTACAAGGATTGGATGCGACACAAATCAGCAACAGATCCATGCCCTTTGTGAAAAGTGTTGATTATCAATAGTATTGTTTTGAAGCCTATGAAATGTCAGCATTGGGTAGATAAAGAAATTGAAAGATGGAATTGCTTTGAACTGGGGCAAGGATGTATTTTACCCAAACAATATTTTGGGGTTAGGTGTGCTTTAACACAGACTTAGGTTTTTTCTTTTTGATCAAATAATTTGCACAAACAGATTTGTGGAGCTTCACTTTTTAGTTGGTTTTCTTaaaaaaaaaaaaaaaaaaaaaagaaagaaaaaaaTCATTTGTTAATATTATTGACAGATTGGGATTCATGTACTGAATAAGTAGAGTATACTTTTATCCAGATGTTAAACATTCCAAGACATTAGGTGTGACAAGGCAGGCCTGTCACAACAGTGTGGATGTTATGCTAATGTATTCTAATGGGTGTAAAGTTTGTTTTAATTTTTATCAGAGAATTCGAAATTCAAGAGGAAATATTTATAGTTCGCAATGGTTATTTACCCGTAGTAGTTTATCTATATCACAGCTGAAATATTCAAATGAAATTGGTGTATCCTAAGCCCTATTTTATCCCTGATTTTTTCATTATGCTATTATAACAAGACCACATGTTGATCAATAATTGGTGGCCAAAAAACTCGTACTGTTTGCTAATGGGTGATCTGGTAAGTCCAGTGCTTTGTGAAGGTTCATTTGAAATAATTTACAGATGCTTTTGGACAAAGCAATGGTAGCAAATCAGTTTTTCTTTCTTTCGAGTTTGTAAATGTTAGGCTCTCTTTTCTTTTCCAGGCTTTTGTATTCTAAGAGAAGACTGTCGTTCTGTTTGATGAGTTTGTAATATTGTCAAGATTGAGCCACGGCAATTTTGTGGTGACGAGTTAATTTATTGAATATTGAGCTTTTGAGAGCTTTTGTTTGTACGACTGTAATGGAGGAGTAGAGGAATAAAAGGACATGTTTCTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7SYM0	Uridine-cytidine kinase 2-A OS=Danio rerio OX=7955 GN=uck2a PE=2 SV=1
Q9BZX2	Uridine-cytidine kinase 2 OS=Homo sapiens OX=9606 GN=UCK2 PE=1 SV=1
B1H116	Uridine-cytidine kinase 2 OS=Xenopus tropicalis OX=8364 GN=uck2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000924 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00485 all species →	PRK	Phosphoribulokinase / Uridine kinase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000764 all species →	Family	Uridine kinase-like	Interproscan
IPR006083 all species →	Domain	Phosphoribulokinase/uridine kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10285 all species →	URIDINE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0050262 all species →	Molecular Function	ribosylnicotinamide kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00876	udk, UCK; uridine kinase	EC:2.7.1.48	Drug metabolism - other enzymes	ko00983	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.