Gene detail

Detailed information of amic_s0082.g62.t2 in Acropora microphthalma

Genomic Location: sc0000082_pilon:968960...994412
NR annotation: XP_044175661.1, serine/threonine-protein kinase N2-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0082.g62.t2

ATGCAGCAAGGAGGAGTCTTAATGTATGATGGCAAAACTAGGCGTCCAAGCAGACCTGACTTCCATGCAAAAATGCAAAGATCTGGCTCTGAAACGCTTTTGAAAACAGACCTTGAACAGTCCAAAGAGGCATTAAAAATCGAAATTCGCAAGCAACTCAAATTAAAAGAAGGAGCTGAGAATTTAAAGAAGGTCGCCACGGACAGGAAAACTTTAACGCAATGCAACTCTATTTTGAAAGAGGCCACTGCTAAACTTCAAGATCTTCACGATGAATTACAAGATCTCAACGCGAGAGTGTCGGAGGATGTGGCCTCTGAAAATGATGATGCACTGTCCCCAGACAGGACAGATGGTGTATCCAATGGCCCGGGTAGCATTAGAATAGAATCTTTGAAGAAGCAAATAGCTGTGGAAATGAAAGTCAAGCAAGGTGCGGAAAACATGTTGGCAATGTATAGTGCCAGTGGGTCCAAGAAAAAGGACAGTAAACTTGTAGCGGAAGCCCAGCAGATGTTAGAGGACTCAAGAAGAAAGATTGAAATTATTCGAATGGCATTGTTGCGGGAACAACAACAGGGCATGCCAGTTGGACGAGAAGATGGTGTTTTAGTGGGCAATTCTAGTGGAAAGGAAAATGCTGCTCCGGGATTAGGACTTTCTCCTTTAGAATTAAGGATAGAGGATTTGCGGCATCATATTGAAATTGAGTCTAGGGTAATACAGGGTGCAAAAAATATGATCAAGTTTTTGTCTAAGTCTGGGCAAGATAAGAAAGGTCTGCTTGAGGCTGAAAGAAGATTCCATGAATCAACTCAAAAACTAGATTTACTTCAGTGTTCGCTTACAAGGCATGTTGGAGAACTATCCCCTGAGCAAGCAGCTGTCGGAATCTATAAAGATTATAACACAGTACATTCCTATGCTGATCGCAAATCTGTTGGATTGGGGAAACAACAGTTCACGGCTATAACTAAACCAGCTGCACTCACTGGAGAATTAGATGTATGCATACTTGGTGCTGATAGACTCTTAGCAGTTGTTCCTAATCGAGACCCTAGAAAAACTATCAGTTTGGCAATGCTGAGTCCAGACGGCAAGTTAGCAGAACGCACAGGATCCAGCAAGAGGAAAAGTGTTTATAATAGATGGAATGCAGAGGATAGTTTATCAGTTGAAGTGTGCGTAGCCCTTAAACTAGATAACAGCTACGTTGGACAGAGTGCATGGAAGCCATTAGGAAAAGAGTGCTGGAAGGAGCAATTTCACATTGAGTTGGATAAGTCACGAGAACTTGAGGTGGGAGTTTACTGGAGAGACCATCGATCACTCTGTGGCGTAGCATTCTTAAGACTGGAAGAATTTCTTGATAATCAGAGGCATCAAATTCAAGTTCCCCTTGAACCCCAAGGCTGCTTGTTTGCAGAGGTCACATTTCTCAACCCCATGGTGACAAAGAAACCAAGGCTCCAGAGACAAAAGAAGCTGTTTCATGTTCATAAAGGAAAGAATTTTCTTCGGGCTGGTCAGATGAACACCAATGTTGCTACATGGGCCAGATTACTGAAGAGAGCAGCTCCGCCCAACTGTACAACCAATAACACAGCTCTAAGTCCAAATTCAATATCAGCACCATTTCCCAGTGCATCACAACAACCACAAACACAGTCACACCCTCAACAACCCAACTTCAACAGCACCACACCAAACAAGAACAGGAAACAATCATCAGGGGTACCAGCAGGGTCCACCCCAAAGAGACCAGTGAATGAAAATGACGTCCAGGATGCTCTTTCAGCTTTTGGATTTTTAGATAGTCCAAAAAGTCCTCAGAAATCAGATGTCCAACAAATGGCTCCTCAAAGACCAGTTCCACCTGTTAGACGGAAACCTCCCTCACCTCCTACAAGCTCCATCAGTCACATGAACATTGACAGTTTTCGATGCATCAGTGTACTGGGCAGAGGACATTTTGGAAAGGTTATTTTGGCAGAGTACAGAAACACTAACGAACTATTCGCGATCAAGGCTTTGAAAAAAGGAGACATCATTTCACGAGAAGAAGTTGAAAGTCTTTTATCTGAGAAAAGAATATTCTTGACCGCAAACAAGATGCGACATCCATTCTTAGTCAACTTATTTGCGTGTTTCCAAACTGAGGAACATGTGTGTTTTGTAATGGAATATGCTCCAGGTGGAGACCTGATGATGCATATCCATGCAGATGTCTTCTCTGAGCCGAGAACAGTATTCTACACATCGTGTGTTGTTTTAGGCCTTCAATATCTCCATGAACATGAAATAGTCTACAGAGATTTGAAGCTGGACAATTTACTGCTGGATTCAGAAGGTTATGTGAAGATCGCTGATTTCGGTTTGTGTAAAGAAGGCATGGGTTTTGGTGAACGAACAGGGACATTCTGTGGCACCCCGGAGTTTTTAGCCCCTGAGGTTCTTACAGAGACCTCGTACACACGAGCAGTCGACTGGTGGGGACTGGGCGTGCTTATTTTCGAAATGCTCGTAGGAGAGTCTCCATTTCCGGGAGATGACGAAGAAGAAGTCTTCGACTCCATTGTAAACGACGAAGTTCGTTATCCACGGTTTCTATCAACAGAAGCCATCGCGATTATGAGACGGTTACTCAGACGGAACCCTGAGAGAAGGTTGGGAGCTAGCGAAAAAGACGCAGAGGATGTTAGAAAACAGCCTTTCTTTAGGGACATGAATTGGGACGACCTTCTCGCAAGAAAAGTTCGACCTCCCTTTGTCCCAAATGTGCGACACGCGGAGGATGTCAGTAATTTCGATGAAGAGTTTACGTCCGAAGAACCTGTCCTGACCCCACCTAAAGAATCAAGGCTCCTGACAAACGAAGAACAGAAGTATTTTATTGCTGGTATTATTTTTCGCCAATCGAACGCAAATCTTCGATTATCTGACTGCTCGTAA

Transcript

amic_s0082.g62.t2

CGAACAAACTTTTGCAATTGTCGGAGACACTCTTCCGAGATTTTGGAAGGAGTCCTTTGGTTATTTTGTGGTCGTTTCAACGTTCTCTGCAGTTGTTTAGGGCGTCGGGAATTCGTTATAACAGAGATTTAAGTCCTTACCCCCAGCCCTAGTGATATTCTGGCTCCCATACTTCGGTCACCAAGCGTTGGTCGGCTGTTTACTTTGTCTTATACCTAGTTGGTTATGGCCGGTCATGCTTGCGTGAATTCAAAACCTTTTCAGAAGACTGTTGCAGATTAAACGCGGTCTGTTCGACTCCATCGATGAGCTATGCAGCAAGGAGGAGTCTTAATGTATGATGGCAAAACTAGGCGTCCAAGCAGACCTGACTTCCATGCAAAAATGCAAAGATCTGGCTCTGAAACGCTTTTGAAAACAGACCTTGAACAGTCCAAAGAGGCATTAAAAATCGAAATTCGCAAGCAACTCAAATTAAAAGAAGGAGCTGAGAATTTAAAGAAGGTCGCCACGGACAGGAAAACTTTAACGCAATGCAACTCTATTTTGAAAGAGGCCACTGCTAAACTTCAAGATCTTCACGATGAATTACAAGATCTCAACGCGAGAGTGTCGGAGGATGTGGCCTCTGAAAATGATGATGCACTGTCCCCAGACAGGACAGATGGTGTATCCAATGGCCCGGGTAGCATTAGAATAGAATCTTTGAAGAAGCAAATAGCTGTGGAAATGAAAGTCAAGCAAGGTGCGGAAAACATGTTGGCAATGTATAGTGCCAGTGGGTCCAAGAAAAAGGACAGTAAACTTGTAGCGGAAGCCCAGCAGATGTTAGAGGACTCAAGAAGAAAGATTGAAATTATTCGAATGGCATTGTTGCGGGAACAACAACAGGGCATGCCAGTTGGACGAGAAGATGGTGTTTTAGTGGGCAATTCTAGTGGAAAGGAAAATGCTGCTCCGGGATTAGGACTTTCTCCTTTAGAATTAAGGATAGAGGATTTGCGGCATCATATTGAAATTGAGTCTAGGGTAATACAGGGTGCAAAAAATATGATCAAGTTTTTGTCTAAGTCTGGGCAAGATAAGAAAGGTCTGCTTGAGGCTGAAAGAAGATTCCATGAATCAACTCAAAAACTAGATTTACTTCAGTGTTCGCTTACAAGGCATGTTGGAGAACTATCCCCTGAGCAAGCAGCTGTCGGAATCTATAAAGATTATAACACAGTACATTCCTATGCTGATCGCAAATCTGTTGGATTGGGGAAACAACAGTTCACGGCTATAACTAAACCAGCTGCACTCACTGGAGAATTAGATGTATGCATACTTGGTGCTGATAGACTCTTAGCAGTTGTTCCTAATCGAGACCCTAGAAAAACTATCAGTTTGGCAATGCTGAGTCCAGACGGCAAGTTAGCAGAACGCACAGGATCCAGCAAGAGGAAAAGTGTTTATAATAGATGGAATGCAGAGGATAGTTTATCAGTTGAAGTGTGCGTAGCCCTTAAACTAGATAACAGCTACGTTGGACAGAGTGCATGGAAGCCATTAGGAAAAGAGTGCTGGAAGGAGCAATTTCACATTGAGTTGGATAAGTCACGAGAACTTGAGGTGGGAGTTTACTGGAGAGACCATCGATCACTCTGTGGCGTAGCATTCTTAAGACTGGAAGAATTTCTTGATAATCAGAGGCATCAAATTCAAGTTCCCCTTGAACCCCAAGGCTGCTTGTTTGCAGAGGTCACATTTCTCAACCCCATGGTGACAAAGAAACCAAGGCTCCAGAGACAAAAGAAGCTGTTTCATGTTCATAAAGGAAAGAATTTTCTTCGGGCTGGTCAGATGAACACCAATGTTGCTACATGGGCCAGATTACTGAAGAGAGCAGCTCCGCCCAACTGTACAACCAATAACACAGCTCTAAGTCCAAATTCAATATCAGCACCATTTCCCAGTGCATCACAACAACCACAAACACAGTCACACCCTCAACAACCCAACTTCAACAGCACCACACCAAACAAGAACAGGAAACAATCATCAGGGGTACCAGCAGGGTCCACCCCAAAGAGACCAGTGAATGAAAATGACGTCCAGGATGCTCTTTCAGCTTTTGGATTTTTAGATAGTCCAAAAAGTCCTCAGAAATCAGATGTCCAACAAATGGCTCCTCAAAGACCAGTTCCACCTGTTAGACGGAAACCTCCCTCACCTCCTACAAGCTCCATCAGTCACATGAACATTGACAGTTTTCGATGCATCAGTGTACTGGGCAGAGGACATTTTGGAAAGGTTATTTTGGCAGAGTACAGAAACACTAACGAACTATTCGCGATCAAGGCTTTGAAAAAAGGAGACATCATTTCACGAGAAGAAGTTGAAAGTCTTTTATCTGAGAAAAGAATATTCTTGACCGCAAACAAGATGCGACATCCATTCTTAGTCAACTTATTTGCGTGTTTCCAAACTGAGGAACATGTGTGTTTTGTAATGGAATATGCTCCAGGTGGAGACCTGATGATGCATATCCATGCAGATGTCTTCTCTGAGCCGAGAACAGTATTCTACACATCGTGTGTTGTTTTAGGCCTTCAATATCTCCATGAACATGAAATAGTCTACAGAGATTTGAAGCTGGACAATTTACTGCTGGATTCAGAAGGTTATGTGAAGATCGCTGATTTCGGTTTGTGTAAAGAAGGCATGGGTTTTGGTGAACGAACAGGGACATTCTGTGGCACCCCGGAGTTTTTAGCCCCTGAGGTTCTTACAGAGACCTCGTACACACGAGCAGTCGACTGGTGGGGACTGGGCGTGCTTATTTTCGAAATGCTCGTAGGAGAGTCTCCATTTCCGGGAGATGACGAAGAAGAAGTCTTCGACTCCATTGTAAACGACGAAGTTCGTTATCCACGGTTTCTATCAACAGAAGCCATCGCGATTATGAGACGGTTACTCAGACGGAACCCTGAGAGAAGGTTGGGAGCTAGCGAAAAAGACGCAGAGGATGTTAGAAAACAGCCTTTCTTTAGGGACATGAATTGGGACGACCTTCTCGCAAGAAAAGTTCGACCTCCCTTTGTCCCAAATGTGCGACACGCGGAGGATGTCAGTAATTTCGATGAAGAGTTTACGTCCGAAGAACCTGTCCTGACCCCACCTAAAGAATCAAGGCTCCTGACAAACGAAGAACAGAAGTATTTTATTGCTGGTATTATTTTTCGCCAATCGAACGCAAATCTTCGATTATCTGACTGCTCGTAAGCTTTGAATGGTCACTTATACAGGACTGTGTTTCATCCTCTTTTCTTTTCGTTAGTGCGCGTGCAAAAATCGCGAGAGGTTCGGGTGTACGTGTTGTTGCTGAACTATCCCTCGCGAGTATTTTCTATTAAGAATTTTTCCTCCCCTTCTGTATTACTTCTTCTGTGCGAAGAGAGAGAACTGCCTGAGCTGTGTGTTTTTTTTTTCCCTTTGTCCCTGTTTCTTTTACAGAGGTGTTTATTCATAAAAGCCGTTTTACTTTCACCGTTGAATATCCGAAGAAATGAGAGCAATCTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q16513	Serine/threonine-protein kinase N2 OS=Homo sapiens OX=9606 GN=PKN2 PE=1 SV=1
A7MBL8	Serine/threonine-protein kinase N2 OS=Danio rerio OX=7955 GN=pkn2 PE=2 SV=1
Q8BWW9	Serine/threonine-protein kinase N2 OS=Mus musculus OX=10090 GN=Pkn2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002889 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02185 all species →	HR1	Hr1 repeat	Family	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00433 all species →	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000961 all species →	Domain	AGC-kinase, C-terminal	Interproscan
IPR011072 all species →	Domain	HR1 rho-binding domain	Interproscan
IPR037313 all species →	Domain	Serine/threonine-protein kinase N, first HR1 domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036274 all species →	Homologous_superfamily	HR1 repeat superfamily	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017892 all species →	Domain	Protein kinase, C-terminal	Interproscan
IPR050236 all species →	Family	Serine/threonine-protein kinases, AGC	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24356 all species →	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0082.g62.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.