Detailed information of amic_s0082.g67.t2 in Acropora microphthalma

Genomic Location: sc0000082_pilon:1072680...1124178
NR annotation: XP_029182362.2, A disintegrin and metalloproteinase with thrombospondin motifs 6-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UKP5A disintegrin and metalloproteinase with thrombospondin motifs 6 OS=Homo sapiens OX=9606 GN=ADAMTS6 PE=1 SV=2
Q8TE57A disintegrin and metalloproteinase with thrombospondin motifs 16 OS=Homo sapiens OX=9606 GN=ADAMTS16 PE=1 SV=3
Q69Z28A disintegrin and metalloproteinase with thrombospondin motifs 16 OS=Mus musculus OX=10090 GN=Adamts16 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000928 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01562
all species →		Pep_M12B_propepReprolysin family propeptideFamilyInterproscan
PF17771
all species →		ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF00431
all species →		CUBCUB domainDomainInterproscan
PF01421
all species →		ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF19030
all species →		TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF19236
all species →		ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050439
all species →		FamilyADAMTS and ADAMTS-likeInterproscan
IPR013273
all species →		FamilyADAMTS/ADAMTS-likeInterproscan
IPR002870
all species →		DomainPeptidase M12B, propeptideInterproscan
IPR001590
all species →		DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000859
all species →		DomainCUB domainInterproscan
IPR035914
all species →		Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR041645
all species →		DomainADAMTS, cysteine-rich domain 2Interproscan
IPR024079
all species →		Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR045371
all species →		DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723
all species →		ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0030198
all species →		Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0082.g67.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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