Gene detail

Detailed information of amic_s0084.g2.t1 in Acropora microphthalma

Genomic Location: sc0000084_pilon:7354...15655
NR annotation: KAJ7378647.1, cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Desmophyllum pertusum]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0084.g2.t1

AGTTACTTATTTCTCTATAATGTTTTAAATCAGGCTCTTCCAAGACGAATACTGTGTGAAAATGTCATTTTTCGAGAAGCGTTGTCTGTACTACCCCACTGAGTAAATTATTATCACAGCTCTCTATGCGCAAAAAATTTTACGTGGCTAAAAGGTCGTCTTATGTTCCATTTTACATCTATTCTTAGAACGATCTCCCATTCTGTTAAAAGAGCGATGTCATCTGCAGTCAAACCTACGGTAATATTTGTTTTAGGCGGACCTGGTGCTGGGAAAGGAACACAGTGTGAAAAAATTGTTAAGGAATTTGGTTATATACACTTGTCAGCTGGTGAACTCTTGCGAGAAGAGAGAGCTAGTGGCTCAGAAAATGGTGATCTCATTGAATCTTGCATGAAAGAAGGAAAGATTGTTCCTGTGGAAATAACAATTAGCTTGATTGAAAAGGCAATGAACAAAAATTGTGTGAAGAAATTCCTTATAGATGGGTTCCCACGAAATCAAGATAATCTTCAAGGCTGGAACAAAGTAATGGAAGAAAAAGTGTTGCTGAAATGTGTCCTCTTCTTTGAATGCACTCAAGATGAATGTGAAAGAAGAATAATGGAGAGAGCTAAATCTAGTGGAAGACCTGATGATAATCTTGAAAGTCTCAGGAAAAGATTCCAGAATTACATAACGCAAACACTGCCAGTTATTCAACACTATGAAGACTTAGGACTTGTGAAGAAGATTCAAGCCATAAAAACACCAGAGGAGGTATTTGATGAAGTTCAAAATGTATTGACAAGCTTGGAATAATCCCAATTGTCATAGCCTGTCTGTGAATAATTTTATACAAGTCTTACTGTCTGGTCTTCAGTAGAATTCCAAACTTTTAGCGTCAGTGGTCATTTTGTGAGAGTGTTGACACGGAAATCATCTCACGTGATCATATCAAATCAagcagttttcaaaatgaaatgattctcgaaagtgattatgcgatATTACGCGATtgcgatatgctaagctttgtgattggctaaaaattctgtcgccggtgtttcaaccaatgagcagcaaactaaattcaatcgcaccttgtacgctcgatttgtcccgcgtttctatcaagttacaggtaactgctaggaactctggcccaagtttctcgaagcatggttagcgctaaccatcgttaactaccttagaaacataggtttcgataattctaaacaaatagttcgcgctaaccatgattcgagcaaccggccactgattggttcatcgcactgtttactcctgttgtgattggttggagttaaaacttttgtattggcttttcgcccgacactttgaaaagcactctaTCAGTGTTTAAAAAAGGAAATTCTATCACGATGTGAAAAAAACGAACCTGGATCACAACTCTGAGAAAAGAAGTCACAGATCACCTGCAAAAATTCAGAGTTCTGCTTACCGCGATGAACATCATCCACTGGATTAGAAATAAAATAGAATTGAAAGCCTCTGTTTTAATCCACAAGTCTTGAAGCTAAAAGCTTTTAAGGTCTTGTATTACAAATAATAAGTAAAAATTAAAACTACTCACGCTATAAGGACCCGATGTATAGGTAAAATATTTACATGTCAGCAAACTGtcatcatgatgccgcacagtggagGCTAGAACTGGGATGGCAAATGCTTAATATAATGGTAACAACTATTACAGTAGATAGTGTCCGACGAATTCCTCTAAACTTCCTTATCGCTTTCCAAGGACGTCATCTAAAACCTGAAGGCCCGAAAAGCGTGTAGTCATGGGCTGTATTTCCCTCCATACGTTTGTCGATACATTGTTCCCGTTGACAACACAAAGTTTCCAAGCAAATTTACTGAAAAACACCATTTTGTGTGGCAATTATTCGTGTTTGAGACTGATCTTGACGTGTGCCCTATTTCCTTCAGCTGAGTTGTATCAAGAGTTTCTTTCGTTTTCATGGAATGGTTTCTGGAGACAACCTAGTTCTCACTCTCCGAGAGACCTTGGGAAAGGGCGTGTTCTAATAATGATGGTATTGCTATTGTACAATAGTTAAATTTGTTTTCTTTGTTTTACGTCAAACACAAGTTTGACAGGTTCTTATAATGATGATGCGCCGAACTTCTTCAATGTTTACATTGCCGATTATGCAGGATATTGACGAGAATTACGGGAACGTCGCAGAAAATGGAGAGAATGGCGTCTTACGGCGAGGCGCTAAACTCAAAGAGTAATATGCTACACTAGTTATTTGACCTGTTTGATATAAATTCGATCTGAGTTGGTGTGGAAAGCTGCATTAGAACTGCTTTATTCTTTGAAATTTAAAGGAAAGATATAAGGCTCAATAAAAGATTGTCATGTTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P30085	UMP-CMP kinase OS=Homo sapiens OX=9606 GN=CMPK1 PE=1 SV=3
Q2KIW9	UMP-CMP kinase OS=Bos taurus OX=9913 GN=CMPK1 PE=2 SV=2
Q9DBP5	UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005369 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00406 all species →	ADK	Adenylate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000850 all species →	Family	Adenylate kinase/UMP-CMP kinase	Interproscan
IPR033690 all species →	Conserved_site	Adenylate kinase, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006266 all species →	Family	UMP-CMP kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23359 all species →	NUCLEOTIDE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006139 all species →	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0019205 all species →	Molecular Function	nucleobase-containing compound kinase activity	Interproscan
GO:0004127 all species →	Molecular Function	(d)CMP kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006225 all species →	Biological Process	UDP biosynthetic process	Interproscan
GO:0033862 all species →	Molecular Function	UMP kinase activity	Interproscan
GO:0046705 all species →	Biological Process	CDP biosynthetic process	Interproscan
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0009041 all species →	Molecular Function	UMP/dUMP kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13800	CMPK1, UMPK; UMP-CMP kinase	EC:2.7.4.14	Drug metabolism - other enzymes	ko00983	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.