Gene detail

Detailed information of amic_s0084.g32.t1 in Acropora microphthalma

Genomic Location: sc0000084_pilon:530143...592603
NR annotation: XP_044169450.1, dedicator of cytokinesis protein 7-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0084.g32.t1

ATGGCCACTGAAACACCTATTGGATACACGTGGATTCCTGCTGTTAAGGAAGGTCGGCTGTCTCTAGGGGAATTTCATCTTCCTGTGTCATTGGAGAAACCTCCCCCGAGTTACAGCATGCTCTCACCAGAGGTTCCTCTTCCTGGAATGAAATGGCTTGAAGGTCATAAGGGTGTGTTCCATGTTGCTGTGAGAGCTGTGTCTTCCATCCATCCACAGGATTTGCATATTCAAAAATTTCTCAAGACCTGTCATCAAATCGAGGGGCGTGTGACGTCATCACCCAACCGTACCGCTGAAGGGAACTTGGAATCAGCGCTGAGGAAAAGCATAGTCGACCTGTGCAAGGCGCGCGAGGAACCTTTGGTGCGGTTTTTATACCTTGTATTGGATAAACTGATTTTGCTGCTTGTCAGGCCGCCTATTATCTCTGGAACTGTAGTGAATATTGGCCAAGCAGCGTTTGAATCGCTCACACAGATTGTTGACCGGCTGCATCAGTTACTGGAAAATAGTCAAGATGAACATGGTCGCAATCAGCTGTTATCGTCTTACATCACATATGTGTTCTCCGCGCCGTACAGCCACTCACCTACATCTTCACCGGATCATCGTAGTGGTCACAGAGAGCCGGGTCGCTCAGCGAGTATCCCCGTTGGTCTGCAAAGCAAATCCCGTCAGAAGCTGTCAAGCAGCAATCCTCAGCTGAATGCCACGTTGACCGATGAAAAGCCAGAGTTACTTGGATGCTGGGAAGACGATGGTGAGGAGATTACATGCGAGGGCATGAACGTGCCCGGCAACAGAAGCAGTATGGCAGAAGGACGGTCGAACACTCTTGGTGCCCCTAGAATGAGTCAAAGCACTTCCACCAATAGCAGAAAGTTAGTTCATGAAGAGTTGGGGTTACAGTGGGCCGTGGCCAGTGGTCCCCTGAAGGAAAAAGCCATGGCGCATGCGTGGTTCTTTTTTGAACTCATGGTTAAGAGTATGGCTCAACATCTTGAAAACACCGACAAGTTCTTTTGGACAAGAAAAAGTCGTTTCCCGGAACAGTTTCTGGGCGATATACGAGCCATGGTGAACTCTACAGTCTATGAAATCGCCACAAAGATAGAGGATTTTGTTCTAGCGGAGAGGTTGAACTCTAGTCTTGCCTTCTTCTTGTTTGACCTTTTTTCATTGACTGACAGAGGCTTTGTGTTTGAACTTGTCAAGCAGTACTGCAAAGAGATGCTGTATCAAAGCACCGATTTTCCTGAAGCATCACAACTCAGACTCGAATTCCTGCGGATAGTTTGCAGCCATGAACATTACGTAACCCTCAACCTACCCTTCCCTAGCCCATTGTATCCATCCCCACCCATCTCCCCGACAAATTCAGTGTCGTCCATTGCCTCGTCGGCATCCGCCTATACCGTCATTATCGGAAACAGTGTAGCAGAGTTGTCAACTGCATTTAGACAGCAGCACTTCTTGGCTGGCTTGGTCTTATCTGAACTGGCTTTGGCATTAGAAGGAGGTGAAATGACCTTGATAAACCAAGCCATCGATACCACAAGAGACCTGATAGCCGGTCACGACTCAGACACGCGATACGATGAAGTGCCGTGTCGGTCTGCCGTTGCCGCCCTGTACCTGCCCATTGTTGGTCTTGTTATCGGCGCATTACAGCAACTCCATGGTTACGGCAGCGCGGAAAACTCCAGTATCACTCCGGATGTGGCAATGGCCATTGCTACATCGAGCATAATGGGTGGTTTGGCAGTTGAAGAAAACAAGGGCGACCTTAGTTCGCAGAAGAGTAAACCACAGCAGTTCAGCCCGGAGACAACACGGAACCTATTGGTTTGTTTCCTATGGGTGCTCAAGAATGTAGACAGTCAGGTACTCAAAGATTGGTGGTCGGATCAGCCTGCTTCAAGACTGGGTTTGCTTCTCGATGTGCTTCGTTTATGCGTTTCTCTGTTCGAGTACAGTGGCAAAGTTCAAAAGTCTTCACAGAATCCCACGGCACCAAGACCAAAAGCACAGCAAGAGATGAAAGCTAAACTTGAGGAGATGATGCTCGGAAACAAAGGAGCAGCCAAGGAAATGATGCAGCGACATAGTAGAGTGATGCTGGAGAAAGGCCAGTCACCAAGCTCTGAGTCAAGATTAAGATGGCGTAAAGATCAAACACAATGGAGACAAGCTGCTGACCAGCTGGACAGGCTCCGCCCTGAGGCAGAAGTCACTTCCCAGATTGAAGGTTCGCTGGCAGCTGAAGTTAGTTCAATTGTGCTTGATTCACTGGAACACCTGGTTCAGACTGTGACAACCTCGGACTCGCTTCGTGTGGTTCTGAGTGGAATTCTGAGGGTGCTGCTGCATTGTCTCAACTGCAATCAGAGTGAGATCGTTTTGCAAAACATGTTTGCTACACAGAGGTCTATTGTTTATAAGTTCCCTGAGTTACTATTCGAAGATGACACGGAGCTATGCGCAGACCTGTGCTCCAGGCTCCTTAATCACTGCAGCTCGGCCATCAGCAGTATTCGGGCCCAAGCCAGCTCATCTCTCTATCTTTTGATGAGACAGAATTTTGAAATTGGAAACAACTTTGCTCGAGTCAAGATGCAAGTTACAATGTCGCTCTCCACTCTAGTTGGGACTTCACATACTTTCAATGAAGATCATTTGCGTCGCTCCTTAAAAACCATCATAATATACGCTGAATCAGACCAGGAGCTCAAGACAAGCACTTTTCCCGATCAGGTCAGAGAACTGGTCTTCAATTTGCACATGATTTTGTCGGACACAGTCAAGATGAAAGAATACCAAGAGGATCCAGAAATGTTGATAGACCTAATGTACAGGATAGCTAAAGGATATCAAAATTCGCCTGATCTGAGATTAACCTGGCTGTACAACATGGCTGCCAAGCATGGCGAGCTGACTAACCATGTTGAAGCAGCCATGTGTCTAGTTCATACAGCTGGCCTTGTGTCCGAGTATCTGAGTATGCTGGAAGACAAGCCAGAGCTGCCCATTGGATGTGTTTCCTTCGAGAAAATTTCTCCAAATGTTCTGGAGGAGAGTGCTATTTCAGATGATGTCGTTTCGCCTGACGAAGAAGGCATTTGTACTGGCAAGTATTTTAGTGAAAATGGTTTGGTCTCGCTGCTTGAGATGGCCGCCAACAGATTTACTCTTGCGCAGTTGTTTGAATGCGTCAATGAAGTTTACAAATTGCTTATACCGATACTTGAGGCCAGACGCGACTACAAGAAACTAACTGCCGTACATAAAAAACTATCCGAAGCGTTTGGCAAGATTATACAAACGGAAGGAAAGCGTATGCTGGGGACATATTTCCGAGTTGGATTTTATGGATCTAAGTTTGGTGATCTCGACGGTGAAGAGTACATTTACAAAGAACCAGCGATTACAAAGCTGCCTGAGGTTTCACATCGACTCCAGGCTTTTTATGGCGCAAAATTTGGCGCAGACGTTGTGGAAGTGATCAAAGATTCCAATGCTGTCGAACAGGACAAACTTGATCCAGAAAAAGCCTACATTCAGCTGACATATGTGGATCCTTACTTTGATGAGTATGAACTGAAAGACCGTATAACTTACTTCGACAAGAATTTCAATTTGAGGCGATTTAAGTATGACACACCGTTCACTCCGAGTGGGAAAGCACATGGGGAGCTTGTTACACAGTACAAGAGAAAGACCATCCTGACAACTGCCAATTCATTTCCTTATGTTAAGACAAGAATCAACGTTGTACACCGAGAACAGATTGTTCTCAGTCCTATTGAAGTTGCTATTGAAGATATGGAAGTTCGGACCAAAGATCTTGTGAATGCAGTGCAACAAGAACCGCCTGATGCCAAGATGCTGCAAATGGTATTGCAGGGGTCCATTGGCGCCACAGTCAATCAGGGTCCACTGGAGATTGCAGTGGTGTTTCTGTGTCAAGGTCAGGAATCTAACGAAGAGGGAGAAAGTCAAATGTTCACCAGACATCACCACAGACTAAGGCTTTCATTCAAGGAGTTTGTGAAAAGGTGTGGCGATGCACTGCAGAAGAACAAGCACCTGATTACACTTGACCAACGTGCTTATCAAAAGGAACTTGAAAGAAATTACACTAAACTAACAGAAAAACTTGAACCTCTCTTGAAGAACAAGTTTGGATCACTGCGCGGATCAATGAGACAAAAGGAAGGGTCTGCTTTACTGAGAAAGATCTCCATGAGTTTCAGCGCTGGACACAGTGTCGCTTAG

Transcript

amic_s0084.g32.t1

AAAGTCTTTAAATCGTGTCTTTGTCTACAGTGTTTGTTTGGCAAGTCAAGCACCTCAGCAATGCAATCAGAAGCTTGGTCAGCAGTTACCTATCACAACAAGACGCCAGACTTCTATGAGGAAGTGAAGGTCAAGTTACCAGCCCACCTCACGGTCGAGCATCATTTGCTTTTCACATTTTACCACATCAGCTGCTCAGCTGGCAAGAAAGCAGATGATAAAATGGCCACTGAAACACCTATTGGATACACGTGGATTCCTGCTGTTAAGGAAGGTCGGCTGTCTCTAGGGGAATTTCATCTTCCTGTGTCATTGGAGAAACCTCCCCCGAGTTACAGCATGCTCTCACCAGAGGTTCCTCTTCCTGGAATGAAATGGCTTGAAGGTCATAAGGGTGTGTTCCATGTTGCTGTGAGAGCTGTGTCTTCCATCCATCCACAGGATTTGCATATTCAAAAATTTCTCAAGACCTGTCATCAAATCGAGGGGCGTGTGACGTCATCACCCAACCGTACCGCTGAAGGGAACTTGGAATCAGCGCTGAGGAAAAGCATAGTCGACCTGTGCAAGGCGCGCGAGGAACCTTTGGTGCGGTTTTTATACCTTGTATTGGATAAACTGATTTTGCTGCTTGTCAGGCCGCCTATTATCTCTGGAACTGTAGTGAATATTGGCCAAGCAGCGTTTGAATCGCTCACACAGATTGTTGACCGGCTGCATCAGTTACTGGAAAATAGTCAAGATGAACATGGTCGCAATCAGCTGTTATCGTCTTACATCACATATGTGTTCTCCGCGCCGTACAGCCACTCACCTACATCTTCACCGGATCATCGTAGTGGTCACAGAGAGCCGGGTCGCTCAGCGAGTATCCCCGTTGGTCTGCAAAGCAAATCCCGTCAGAAGCTGTCAAGCAGCAATCCTCAGCTGAATGCCACGTTGACCGATGAAAAGCCAGAGTTACTTGGATGCTGGGAAGACGATGGTGAGGAGATTACATGCGAGGGCATGAACGTGCCCGGCAACAGAAGCAGTATGGCAGAAGGACGGTCGAACACTCTTGGTGCCCCTAGAATGAGTCAAAGCACTTCCACCAATAGCAGAAAGTTAGTTCATGAAGAGTTGGGGTTACAGTGGGCCGTGGCCAGTGGTCCCCTGAAGGAAAAAGCCATGGCGCATGCGTGGTTCTTTTTTGAACTCATGGTTAAGAGTATGGCTCAACATCTTGAAAACACCGACAAGTTCTTTTGGACAAGAAAAAGTCGTTTCCCGGAACAGTTTCTGGGCGATATACGAGCCATGGTGAACTCTACAGTCTATGAAATCGCCACAAAGATAGAGGATTTTGTTCTAGCGGAGAGGTTGAACTCTAGTCTTGCCTTCTTCTTGTTTGACCTTTTTTCATTGACTGACAGAGGCTTTGTGTTTGAACTTGTCAAGCAGTACTGCAAAGAGATGCTGTATCAAAGCACCGATTTTCCTGAAGCATCACAACTCAGACTCGAATTCCTGCGGATAGTTTGCAGCCATGAACATTACGTAACCCTCAACCTACCCTTCCCTAGCCCATTGTATCCATCCCCACCCATCTCCCCGACAAATTCAGTGTCGTCCATTGCCTCGTCGGCATCCGCCTATACCGTCATTATCGGAAACAGTGTAGCAGAGTTGTCAACTGCATTTAGACAGCAGCACTTCTTGGCTGGCTTGGTCTTATCTGAACTGGCTTTGGCATTAGAAGGAGGTGAAATGACCTTGATAAACCAAGCCATCGATACCACAAGAGACCTGATAGCCGGTCACGACTCAGACACGCGATACGATGAAGTGCCGTGTCGGTCTGCCGTTGCCGCCCTGTACCTGCCCATTGTTGGTCTTGTTATCGGCGCATTACAGCAACTCCATGGTTACGGCAGCGCGGAAAACTCCAGTATCACTCCGGATGTGGCAATGGCCATTGCTACATCGAGCATAATGGGTGGTTTGGCAGTTGAAGAAAACAAGGGCGACCTTAGTTCGCAGAAGAGTAAACCACAGCAGTTCAGCCCGGAGACAACACGGAACCTATTGGTTTGTTTCCTATGGGTGCTCAAGAATGTAGACAGTCAGGTACTCAAAGATTGGTGGTCGGATCAGCCTGCTTCAAGACTGGGTTTGCTTCTCGATGTGCTTCGTTTATGCGTTTCTCTGTTCGAGTACAGTGGCAAAGTTCAAAAGTCTTCACAGAATCCCACGGCACCAAGACCAAAAGCACAGCAAGAGATGAAAGCTAAACTTGAGGAGATGATGCTCGGAAACAAAGGAGCAGCCAAGGAAATGATGCAGCGACATAGTAGAGTGATGCTGGAGAAAGGCCAGTCACCAAGCTCTGAGTCAAGATTAAGATGGCGTAAAGATCAAACACAATGGAGACAAGCTGCTGACCAGCTGGACAGGCTCCGCCCTGAGGCAGAAGTCACTTCCCAGATTGAAGGTTCGCTGGCAGCTGAAGTTAGTTCAATTGTGCTTGATTCACTGGAACACCTGGTTCAGACTGTGACAACCTCGGACTCGCTTCGTGTGGTTCTGAGTGGAATTCTGAGGGTGCTGCTGCATTGTCTCAACTGCAATCAGAGTGAGATCGTTTTGCAAAACATGTTTGCTACACAGAGGTCTATTGTTTATAAGTTCCCTGAGTTACTATTCGAAGATGACACGGAGCTATGCGCAGACCTGTGCTCCAGGCTCCTTAATCACTGCAGCTCGGCCATCAGCAGTATTCGGGCCCAAGCCAGCTCATCTCTCTATCTTTTGATGAGACAGAATTTTGAAATTGGAAACAACTTTGCTCGAGTCAAGATGCAAGTTACAATGTCGCTCTCCACTCTAGTTGGGACTTCACATACTTTCAATGAAGATCATTTGCGTCGCTCCTTAAAAACCATCATAATATACGCTGAATCAGACCAGGAGCTCAAGACAAGCACTTTTCCCGATCAGGTCAGAGAACTGGTCTTCAATTTGCACATGATTTTGTCGGACACAGTCAAGATGAAAGAATACCAAGAGGATCCAGAAATGTTGATAGACCTAATGTACAGGATAGCTAAAGGATATCAAAATTCGCCTGATCTGAGATTAACCTGGCTGTACAACATGGCTGCCAAGCATGGCGAGCTGACTAACCATGTTGAAGCAGCCATGTGTCTAGTTCATACAGCTGGCCTTGTGTCCGAGTATCTGAGTATGCTGGAAGACAAGCCAGAGCTGCCCATTGGATGTGTTTCCTTCGAGAAAATTTCTCCAAATGTTCTGGAGGAGAGTGCTATTTCAGATGATGTCGTTTCGCCTGACGAAGAAGGCATTTGTACTGGCAAGTATTTTAGTGAAAATGGTTTGGTCTCGCTGCTTGAGATGGCCGCCAACAGATTTACTCTTGCGCAGTTGTTTGAATGCGTCAATGAAGTTTACAAATTGCTTATACCGATACTTGAGGCCAGACGCGACTACAAGAAACTAACTGCCGTACATAAAAAACTATCCGAAGCGTTTGGCAAGATTATACAAACGGAAGGAAAGCGTATGCTGGGGACATATTTCCGAGTTGGATTTTATGGATCTAAGTTTGGTGATCTCGACGGTGAAGAGTACATTTACAAAGAACCAGCGATTACAAAGCTGCCTGAGGTTTCACATCGACTCCAGGCTTTTTATGGCGCAAAATTTGGCGCAGACGTTGTGGAAGTGATCAAAGATTCCAATGCTGTCGAACAGGACAAACTTGATCCAGAAAAAGCCTACATTCAGCTGACATATGTGGATCCTTACTTTGATGAGTATGAACTGAAAGACCGTATAACTTACTTCGACAAGAATTTCAATTTGAGGCGATTTAAGTATGACACACCGTTCACTCCGAGTGGGAAAGCACATGGGGAGCTTGTTACACAGTACAAGAGAAAGACCATCCTGACAACTGCCAATTCATTTCCTTATGTTAAGACAAGAATCAACGTTGTACACCGAGAACAGATTGTTCTCAGTCCTATTGAAGTTGCTATTGAAGATATGGAAGTTCGGACCAAAGATCTTGTGAATGCAGTGCAACAAGAACCGCCTGATGCCAAGATGCTGCAAATGGTATTGCAGGGGTCCATTGGCGCCACAGTCAATCAGGGTCCACTGGAGATTGCAGTGGTGTTTCTGTGTCAAGGTCAGGAATCTAACGAAGAGGGAGAAAGTCAAATGTTCACCAGACATCACCACAGACTAAGGCTTTCATTCAAGGAGTTTGTGAAAAGGTGTGGCGATGCACTGCAGAAGAACAAGCACCTGATTACACTTGACCAACGTGCTTATCAAAAGGAACTTGAAAGAAATTACACTAAACTAACAGAAAAACTTGAACCTCTCTTGAAGAACAAGTTTGGATCACTGCGCGGATCAATGAGACAAAAGGAAGGGTCTGCTTTACTGAGAAAGATCTCCATGAGTTTCAGCGCTGGACACAGTGTCGCTTAGAGAGGAAGCGCAGCTTACTGTAAAGTTTGTATCTACTCAAGAAATCCCAAGTTTTGTGGCTTGACAAAACTCCCGCGAGGAAATGGCTGTTGTCCTTTGGCAGATTACGCCATTCGATTCCATCTTTAGCAGAAAAGAACAGAATAGCACTTCAGTTGTTGGCTGCATGCAAGGATTTTGAAATAATTTCATTTACTTAGCCACAATTTGGGTCTTTAGTCCATTTTATTTTCTAATATAATACCCGATTTGCTTTTTTGTTGTCCTAAGTAAGTTTCGTGTTGTTTATCTCCTCGACTGCTCGCCCTGAAAACGGGTCGAGGGGGACTGGGTCGGTTAACCGTGATGTCATAGATCTTGACGTCATCTGCTTCTCCAAATGTCCTTTAGGAGGCCCTTTTTGTTCAAACACCTATAACGGTGTCTACTGGACAACTCGGTACTCGGCGAAGAAGAGGGACCCAAACCAATTACAGGATAGCCTCCAAGTCGAGACTAACAAGACAATGACTAAAAAGCAAACTATTTGTATATTTGTGCCTTTTTTTTAGAAAATGAGAATATTACTCTATGAAGTGATCAGTAATTGTCCAATGTTATTTTCGGCGGTGCACTGAGACAGAATTCGCGTGATAGCCTGTTGTCCTGTTCTTTGTTGAAGAACAGTTTTTCCCTCTTACATCCAGCTCCCTCGGGATGTCTATATTCTAGAATTGCCAACCGTTTTCATTAAATGGGGGCTTTAAGTTTATTTAGTAAGCGTTTTGTATTTCAAAATTAAAAAATACAGAGAGGAATATTTTGTAATGATGTTTTGCAATAATGACGCGTGGAAGCCGTTACTATTGGCCGTCGTGAGTGTGGTTTTTTTAAATTCATGGAAAGTGCTCGTTTCTATCGTTTTGAAACGGAATCCTTTGCATTGCAAGGAGAAAAATTTTTCAAGCCCAGTTAACTGTAGTAGTGGTTATGAAATTGTTTTTTATTCTGTTATTACGATGCAATTTTTTCCTCACGAAATTTTTGGTGAAGATAACTCATTTGTTAATTATTTGTATTTGTGTATGTTATGTGCGTGAACGAGAGGGCAAGGAGCAAATAAACTGCAACGAAGGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8R1A4	Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=3
Q96N67	Dedicator of cytokinesis protein 7 OS=Homo sapiens OX=9606 GN=DOCK7 PE=1 SV=4
Q8VDR9	Dedicator of cytokinesis protein 6 OS=Mus musculus OX=10090 GN=Dock6 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000663 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14429 all species →	DOCK-C2	C2 domain in Dock180 and Zizimin proteins	Domain	Interproscan
PF06920 all species →	DHR-2_Lobe_A	DHR-2, Lobe A	Repeat	Interproscan
PF20421 all species →	DHR-2_Lobe_C	DHR-2, Lobe C	Repeat	Interproscan
PF20422 all species →	DHR-2_Lobe_B	DHR-2, Lobe B	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027007 all species →	Domain	C2 DOCK-type domain	Interproscan
IPR027357 all species →	Domain	DOCKER domain	Interproscan
IPR043162 all species →	Homologous_superfamily	Dedicator of cytokinesis, C-terminal, lobe C	Interproscan
IPR046769 all species →	Domain	DOCKER, Lobe A	Interproscan
IPR043161 all species →	Homologous_superfamily	Dedicator of cytokinesis, C-terminal, lobe A	Interproscan
IPR046773 all species →	Domain	DOCKER, Lobe C	Interproscan
IPR026791 all species →	Family	Dedicator of cytokinesis	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR046770 all species →	Domain	DOCKER, Lobe B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23317 all species →	DEDICATOR OF CYTOKINESIS DOCK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264 all species →	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0043547 all species →	Biological Process	positive regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21852	DOCK6_7_8; dedicator of cytokinesis protein 6/7/8	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.