Gene detail

Detailed information of amic_s0086.g46.t2 in Acropora microphthalma

Genomic Location: sc0000086_pilon:704513...708747
NR annotation: XP_015776715.1, PREDICTED: serine racemase-like isoform X2 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2XWA9	Serine racemase OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16936 PE=3 SV=1
Q7XSN8	Serine racemase OS=Oryza sativa subsp. japonica OX=39947 GN=SERR PE=1 SV=2
Q9QZX7	Serine racemase OS=Mus musculus OX=10090 GN=Srr PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002523 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291 all species →	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036052 all species →	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR000634 all species →	Binding_site	Serine/threonine dehydratase, pyridoxal-phosphate-binding site	Interproscan
IPR001926 all species →	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43050 all species →	SERINE / THREONINE RACEMASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0003941 all species →	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0018114 all species →	Molecular Function	threonine racemase activity	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0030378 all species →	Molecular Function	serine racemase activity	Interproscan
GO:0070179 all species →	Biological Process	D-serine biosynthetic process	Interproscan
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0086.g46.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.