Detailed information of amic_s0086.g62.t2 in Acropora microphthalma

Genomic Location: sc0000086_pilon:1006110...1024608
NR annotation: XP_029205050.2, smoothelin-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SXY1Cytospin-B OS=Mus musculus OX=10090 GN=Specc1 PE=1 SV=2
Q5M775Cytospin-B OS=Homo sapiens OX=9606 GN=SPECC1 PE=1 SV=1
Q2KN93Cytospin-A OS=Danio rerio OX=7955 GN=specc1la PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000802 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →
CHCalponin homology (CH) domainDomainInterproscan
PF12510
all species →
SmoothelinSmoothelin cytoskeleton proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001715
all species →
DomainCalponin homology domainInterproscan
IPR036872
all species →
Homologous_superfamilyCH domain superfamilyInterproscan
IPR050540
all species →
FamilyF-actin Monooxygenase MicalInterproscan
IPR022189
all species →
DomainSmoothelinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23167
all species →
CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0086.g62.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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