Gene detail

Detailed information of amic_s0088.g37.t1 in Acropora microphthalma

Genomic Location: sc0000088_pilon:517309...520391
NR annotation: XP_020621616.1, barrier-to-autointegration factor-like [Orbicella faveolata]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P026	Barrier-to-autointegration factor OS=Danio rerio OX=7955 GN=banf1 PE=1 SV=1
Q66KV4	Barrier-to-autointegration factor B OS=Xenopus laevis OX=8355 GN=banf1-b PE=1 SV=1
Q6NTS2	Barrier-to-autointegration factor A OS=Xenopus laevis OX=8355 GN=banf1-a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006382 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02961 all species →	BAF	Barrier to autointegration factor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004122 all species →	Family	Barrier- to-autointegration factor, BAF	Interproscan
IPR036617 all species →	Homologous_superfamily	Barrier-to-autointegration factor, BAF superfamily	Interproscan
IPR051387 all species →	Family	Barrier-to-autointegration factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47507 all species →	BARRIER TO AUTOINTEGRATION FACTOR 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21870	BANF; barrier-to-autointegration factor	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.