Detailed information of amic_s0088.g47.t1 in Acropora microphthalma

Genomic Location: sc0000088_pilon:654922...658757
NR annotation: XP_015752441.1, PREDICTED: proto-oncogene c-Fos-like isoform X1 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O77628Protein c-Fos OS=Bos taurus OX=9913 GN=FOS PE=2 SV=2
P01100Protein c-Fos OS=Homo sapiens OX=9606 GN=FOS PE=1 SV=1
P01101Protein c-Fos OS=Mus musculus OX=10090 GN=Fos PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000852 (this species only)
Transcription factor familyTF_bZIP · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00170
all species →		bZIP_1bZIP transcription factorCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004827
all species →		DomainBasic-leucine zipper domainInterproscan
IPR000837
all species →		FamilyAP-1 transcription factorInterproscan
IPR046347
all species →		Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23351
all species →		FOS TRANSCRIPTION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0088.g47.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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