Detailed information of amic_s0089.g5.t1 in Acropora microphthalma

Genomic Location: sc0000089_pilon:111706...122685
NR annotation: XP_015765509.1, PREDICTED: thrombospondin type-1 domain-containing protein 7A-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001175 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF19028
all species →		TSP1_spondinSpondin-like TSP1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR051418
all species →		FamilySpondin/Thrombospondin type-1 domain-containingInterproscan
IPR044004
all species →		DomainSpondin-like TSP1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11311
all species →		SPONDINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007155
all species →		Biological Processcell adhesionInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0089.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP