Detailed information of amic_s0089.g51.t1 in Acropora microphthalma

Genomic Location: sc0000089_pilon:695182...704533
NR annotation: XP_015777695.1, PREDICTED: nucleotide-binding oligomerization domain-containing protein 2-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NFZ3Neuroligin-4, Y-linked OS=Homo sapiens OX=9606 GN=NLGN4Y PE=1 SV=1
O00748Cocaine esterase OS=Homo sapiens OX=9606 GN=CES2 PE=1 SV=1
Q8N0W4Neuroligin-4, X-linked OS=Homo sapiens OX=9606 GN=NLGN4X PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000076 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729
all species →		NACHTNACHT domainDomainInterproscan
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF00135
all species →		COesteraseCarboxylesterase familyDomainInterproscan
PF17776
all species →		NLRC4_HD2NLRC4 helical domain HD2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR019819
all species →		Conserved_siteCarboxylesterase type B, conserved siteInterproscan
IPR019826
all species →		Active_siteCarboxylesterase type B, active siteInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR002018
all species →		DomainCarboxylesterase, type BInterproscan
IPR041267
all species →		DomainNACHT, LRR and PYD domains-containing protein, helical domain HD2Interproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR029058
all species →		Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR050309
all species →		FamilyType-B Carboxylesterase/LipaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11559
all species →		CARBOXYLESTERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0089.g51.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP