Detailed information of amic_s0089.g52.t1 in Acropora microphthalma

Genomic Location: sc0000089_pilon:706752...727646
NR annotation: XP_015777695.1, PREDICTED: nucleotide-binding oligomerization domain-containing protein 2-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95000Cholinesterase 1 (Fragment) OS=Branchiostoma lanceolatum OX=7740 GN=CHE1 PE=3 SV=1
Q92081Acetylcholinesterase (Fragment) OS=Myxine glutinosa OX=7769 GN=ache PE=3 SV=1
Q86GC8Acetylcholinesterase OS=Culex pipiens OX=7175 GN=ACHE1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000076 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729
all species →		NACHTNACHT domainDomainInterproscan
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF00135
all species →		COesteraseCarboxylesterase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019826
all species →		Active_siteCarboxylesterase type B, active siteInterproscan
IPR038359
all species →		Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR051261
all species →		FamilyNOD-like receptor (NLR)Interproscan
IPR029058
all species →		Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR002018
all species →		DomainCarboxylesterase, type BInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106
all species →		NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0089.g52.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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