Gene detail

Detailed information of amic_s0091.g7.t2 in Acropora microphthalma

Genomic Location: sc0000091_pilon:90418...109615
NR annotation: XP_029182861.2, uncharacterized protein LOC114950872 isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0091.g7.t2

ATGCAAGTGTCTGCAGAAGATTTAGCAGCCAGGAGAGTTTTAGTTAAAGATCTGTCCCCAAGATCGAAGGAAGCAGATGTCATTATACATTTTCAGAGAAAGCGAAATGGAGGCGGTGAGGTCGATAGTGTGAGGATGTTAGGCGAAGGAGTTGCAGTCGTTACGTTTGAAAAAAGGGAAGTTGCTCAGTCCGTTATGAAAATGACCCACAAAATACATGATAGTCTGTTATCCCTGGAGCCTTTCCACCGAGCGTCTCCTCGCCAGGTGTTCAAGAGAGTTTTCGGCCGCCTTGATCCTAGTACACACGGAAAAAGTTTTACGCAAATGCAAACTATTCTCCATGTTGTACAACGCGAAAGAAATGTAGAATGCAAAGAAATACCGGATGGCTTTGTCCTGTGTGGGAGCTTGGATGAAATTAAGGCAGTCAGCATCGCTTTGGAAAGCAAACTAATTGAAGAGAGGTCTTTAACGTGGACTTCCCTTGAGGAATTTAACCATGCGGCGAACGTCATAACAGAATCCAAGGTAGTTCATAAATCTTTATCAACGGATGGGAGTGTAATGGGTAGCGTTTCTGAGCATGATCGCTTGCAGACTGAAAGTTCTTTACTAACTTTATCGTCACTGGATGGCCACGTAGAGGCACAAAAAATAAGTGAGAAAGATAACGACGGATCCTCAGCAGTGAACACTCCATTCTTGGAGTCGTGTCATGCCCATGACTCTGTATCGAAGATTGTCGAGCCTATCCAAAGTACAACATCAACACAAGAAAACAATCAGTTAGCGTTGGATGAAAGATGTAACATAATAGAAAGCAGCGACTGCAAAGACAAGAACACTCCATTCTTGGAGTCGTGTCATGCCCATGACTCTGTGTCGAAGATTGTCGAGCCCATCCAAAGTACAACACCAACACAAGAAAACAATCAGTTAGCGTTGGATGAAAGATGTAACATAATAGAAGGCAGCGACTGCAAAGACAGGACTGATTTAAACGGTGACATATCAGGATCTGAATCTCAGTATAGCGTACTACTTGGTGATGGTTCGGCGCACCTTTCAAAAGCCAAGAAGATTAAGGCCCTGAACGAAGAAGAAATTTCCAAACGAAGCATGGAAAACACGGAAACAAAAGAATCTTGTGACGGTAAATCAGTATGTAAGAGCCCTGAGAAAAGGAAGTCGAGAGAGTTGAGCCCCCAGCATCGCAAACAAGCCCCAAAGAAATGCAAATTGATCGACTCACATGACATCCAACCTTGTGAAGGAAAATTAGCTGACGAAAATAGGAACACGATCCAATCCAGTAGCAGCACAACACTTGCATCAAACAAAGCGATTTACCAAAGCTCTTTGGAAGAAGAAAACCGTCAAGTGAAGAGTAATATTAAGGATTCCGAGAATAGAGGAAAACAGAAAACAAATGACGTTGACGTTGGCGTAGAAAATTTTGAAGAGTTCGTTACCGCGACTAATCTCACAGTCAGGCTGTTTGTAGGGGACATAAGCAGACAACAAGTTGATGTTATTCTTTGTCCAACCAATGCAACAATCTCTTGTAGTGAGGGATTGACGAAGATGATACTTGACGAAGGAGGCCAAATAATAGAAGAGGAATTCCTCCGTAAAACGAAGGTTAAGGATGAATTTAGAGAAGGTTATACATTCATCACTTCCTCTGGTGAGTTACCTTCAAACGCCATCCTCCATGCCGTCTTGCCTTTGTGGGAACCTGAAAAACAGGTTGAAAAGGATGTCAAGCGTTGTATCCACAGATGCCTAAAAGATGGACTTATGTTGTGTTCTGGCCACAGACTGGAATCCATCGCTATTCCTCCCTTGGGACAACCTACGAACAACATCCCAATTGAAGTTTCAGCAGAAATTACAACTCGAGTCGTTGCAACGTTTAGTAGAAAGATTGGTCCTTTTCACAATGGAATCAAAGAGGTTCGTGTTGTTGCTGAAAATGACAAATCTCTCGAAACATTTGTTACAAGTTTCTTGTCGTTTTCATTCCCTGGCGAAACTCCATTTTTCGCCAACAAGCGGAAAGAAGCTAAAAGCTCACTGCTAATTGGAAATAATGCTGAAGCAAGCAATTTCGTGTCGTCAATGACATACCCTGAGGCAAAATGTGAAAGCAAAGCTGCAAATTTCAATCGTGCAACTGGTAAGGCGACTGAAGAGCTACCAGATGTAGGTTCTATTGCACTAAACAAAGCGGAAGGTAACGGGGAGATCGAAGCTGATTTATCTAAACAGACTGTGCGGAATAAGGACGTGACGAAATGTGTCAGTGATAACCAACAGAATGCAGCAGTCAATTCCCAGAGAGAGGAATGTGAAGAGATGATTTCTTCACTTGCTAATAATCCAGTACAATGTACTGAAGTTGCTACGATGAAAGCGATTCAAGAAGCGACCAAAACTGCTCATCCCGATACGATTGAACGGAAGGTTGTTGAAGAAGAGATACTTGGGTTTGAACACCGTAAGGAAGAGGTCACCTCGCATATTGATCAGGAAGAAAAAGTGATAGCAAATGCTCAATCCTGCGGCAGAGCGGCGACTGAAATGTCCAGACAGCCTAAACAAGGCACTCAGTCTCCTAAAATAAAAGAATCCTTATTTCCAAAGAGAGTAGGTGAAAAATTTCGAAGCAGACGTCACGGTAACCGGGACATTTTAACAAATGGAACACATGATTCACCTACTCCAAGTAATCAATGTAGGCTGGTTGCTTCCGCAAATTGTCCTGCAAAACCTATCACTTCACCAACTGTTGAGAATCTCTTAAAGGCCGACCTTTGCTTAGGCCCTCAAGGTTTGAAACTTACACTCGAAGACAGGCTTGGTGGTGACTCACACAAAAATGGAGGCCCTAGTCGAGAGGAAAGGATTTTGGGAGAAATGGAGCAACAACTGTCTTCCTTCCTTGCTGAGGGGAATCATGACACAAGCTTAACGGCTGGATCTCAACAAAACTATAACCAGGTGATTGATGGAATCATAGCTGCCCCGCTTCCCGACAAGCAAGCCAACCAACCCCCTGGGGAATTGGTCTGGAAGATAGATAACGAAAGTCTTCCAGGATTTGAGGGATCTGGTACAATTGTTATGTCGTTTCATTTCTATAGTGGGATCCAAGGCACCGAACATCCAAACCCTGGAAATGAATACAAGGGAACATCTTACAAGGCGTACCTACCCGAAACAAAAGAAGGAAAACACATCTTCAAGTTGCTACGAAAAGCATTTGATGCTCGATTGTTATTTACTATTGTAAGTGGTACTTCCGACGGAGTTGGGTGTGTTGATTTAAAAGACATCGAACTGAAGACGTCTTTTGCAAGGAACTTAAGAACTGGTTACCCAGATCCCAGCTATTTGACAAGGGACATTGAAGTCAGGGTTGTAATACCGAACATGAGGAAGTCATACCAGTACGCTCTTTTTGGCAGTTTTCTTGTTATCGGTCAAACCATCGCCTTATGGGAAGTTTGTTATGACAAGTATGGATGCTTCAACTATGCCCCGCCCTTTCACAACTTCTTGATGAGGCTTCCACAAGAACCTTCGATCGTAAACACGACATTTTTCCTTTACACAAGAGCCAATCAAAACATCGCTCAATTAATAGATGACAGCGACCCCATAAAACTCGAGAATTCCAACTTTGATATTTTCAGGAGAACCATTATCATCTGTCACGGTTGGACTGACAACGGGCGTGGTAGTTCTAACGAACACTGGGGATACAGAATGAGAGATGCACTTTTGACCCGGGAAGACAGCAATGTCATTTTGACGGATTGGTCCGGAGGTGCTTTCGAATCCTATGGACAGTCCACTGGGAATGCTCGTCTTGTCGGCGCTCAAATTGCCGAACTTATAAAGATCATAATCAAAAGAAACGGCGATTCTAAGGGTTTGGCAAACAGGTTCTATCTCATCGGGTTCAGCCTTGGAGCTCAAATTACTGGTTATGCCGGGAGCCGTCTTCGCCAAGAGGGAATGAAGCTCAGCCGCATCACGGGTTTAGATCCCGCCAGTCCATTTTTCACTTTCCATGATCCCCTTGTCCGTTTGGATCCAACAGATGCCAAATACGTAGACGTCATTCACACCGATATGCCATTATATGGTACACCCCAAAACGTTGGCCATATTGACTTTTATCCAAATGGTGGAGCAGACCAGCCTGGATGCAACTCTGGACTTCAAGAGATCCTCGCTGGAAAAAGAAGCTGTGATCACCACAGGTCTCCAGAGTACTACATAGCATCGGTACATAACCTTTGTTCATGGGAGGCGTATCCATGCCGCAGCTACATCTGGTATCGTTTGGGGTTTTGCTCCACATGCGATGGAAAATGTCCATTATTGGGGTACGATGCTGATCGGACAATGAAGAAAGGATCACATTACCTGACTACAAATTCTAAGAGGCCATTTTGTGCACAGAGTCCTCCAGCCCGATGGTTATACTGA

Transcript

amic_s0091.g7.t2

GAGTTTGCTGAAGACATGGCGCAGGGTTTTTCTGTCGGCGATTATTCCCTGCCGGCCAAGATGCAAGTGTCTGCAGAAGATTTAGCAGCCAGGAGAGTTTTAGTTAAAGATCTGTCCCCAAGATCGAAGGAAGCAGATGTCATTATACATTTTCAGAGAAAGCGAAATGGAGGCGGTGAGGTCGATAGTGTGAGGATGTTAGGCGAAGGAGTTGCAGTCGTTACGTTTGAAAAAAGGGAAGTTGCTCAGTCCGTTATGAAAATGACCCACAAAATACATGATAGTCTGTTATCCCTGGAGCCTTTCCACCGAGCGTCTCCTCGCCAGGTGTTCAAGAGAGTTTTCGGCCGCCTTGATCCTAGTACACACGGAAAAAGTTTTACGCAAATGCAAACTATTCTCCATGTTGTACAACGCGAAAGAAATGTAGAATGCAAAGAAATACCGGATGGCTTTGTCCTGTGTGGGAGCTTGGATGAAATTAAGGCAGTCAGCATCGCTTTGGAAAGCAAACTAATTGAAGAGAGGTCTTTAACGTGGACTTCCCTTGAGGAATTTAACCATGCGGCGAACGTCATAACAGAATCCAAGGTAGTTCATAAATCTTTATCAACGGATGGGAGTGTAATGGGTAGCGTTTCTGAGCATGATCGCTTGCAGACTGAAAGTTCTTTACTAACTTTATCGTCACTGGATGGCCACGTAGAGGCACAAAAAATAAGTGAGAAAGATAACGACGGATCCTCAGCAGTGAACACTCCATTCTTGGAGTCGTGTCATGCCCATGACTCTGTATCGAAGATTGTCGAGCCTATCCAAAGTACAACATCAACACAAGAAAACAATCAGTTAGCGTTGGATGAAAGATGTAACATAATAGAAAGCAGCGACTGCAAAGACAAGAACACTCCATTCTTGGAGTCGTGTCATGCCCATGACTCTGTGTCGAAGATTGTCGAGCCCATCCAAAGTACAACACCAACACAAGAAAACAATCAGTTAGCGTTGGATGAAAGATGTAACATAATAGAAGGCAGCGACTGCAAAGACAGGACTGATTTAAACGGTGACATATCAGGATCTGAATCTCAGTATAGCGTACTACTTGGTGATGGTTCGGCGCACCTTTCAAAAGCCAAGAAGATTAAGGCCCTGAACGAAGAAGAAATTTCCAAACGAAGCATGGAAAACACGGAAACAAAAGAATCTTGTGACGGTAAATCAGTATGTAAGAGCCCTGAGAAAAGGAAGTCGAGAGAGTTGAGCCCCCAGCATCGCAAACAAGCCCCAAAGAAATGCAAATTGATCGACTCACATGACATCCAACCTTGTGAAGGAAAATTAGCTGACGAAAATAGGAACACGATCCAATCCAGTAGCAGCACAACACTTGCATCAAACAAAGCGATTTACCAAAGCTCTTTGGAAGAAGAAAACCGTCAAGTGAAGAGTAATATTAAGGATTCCGAGAATAGAGGAAAACAGAAAACAAATGACGTTGACGTTGGCGTAGAAAATTTTGAAGAGTTCGTTACCGCGACTAATCTCACAGTCAGGCTGTTTGTAGGGGACATAAGCAGACAACAAGTTGATGTTATTCTTTGTCCAACCAATGCAACAATCTCTTGTAGTGAGGGATTGACGAAGATGATACTTGACGAAGGAGGCCAAATAATAGAAGAGGAATTCCTCCGTAAAACGAAGGTTAAGGATGAATTTAGAGAAGGTTATACATTCATCACTTCCTCTGGTGAGTTACCTTCAAACGCCATCCTCCATGCCGTCTTGCCTTTGTGGGAACCTGAAAAACAGGTTGAAAAGGATGTCAAGCGTTGTATCCACAGATGCCTAAAAGATGGACTTATGTTGTGTTCTGGCCACAGACTGGAATCCATCGCTATTCCTCCCTTGGGACAACCTACGAACAACATCCCAATTGAAGTTTCAGCAGAAATTACAACTCGAGTCGTTGCAACGTTTAGTAGAAAGATTGGTCCTTTTCACAATGGAATCAAAGAGGTTCGTGTTGTTGCTGAAAATGACAAATCTCTCGAAACATTTGTTACAAGTTTCTTGTCGTTTTCATTCCCTGGCGAAACTCCATTTTTCGCCAACAAGCGGAAAGAAGCTAAAAGCTCACTGCTAATTGGAAATAATGCTGAAGCAAGCAATTTCGTGTCGTCAATGACATACCCTGAGGCAAAATGTGAAAGCAAAGCTGCAAATTTCAATCGTGCAACTGGTAAGGCGACTGAAGAGCTACCAGATGTAGGTTCTATTGCACTAAACAAAGCGGAAGGTAACGGGGAGATCGAAGCTGATTTATCTAAACAGACTGTGCGGAATAAGGACGTGACGAAATGTGTCAGTGATAACCAACAGAATGCAGCAGTCAATTCCCAGAGAGAGGAATGTGAAGAGATGATTTCTTCACTTGCTAATAATCCAGTACAATGTACTGAAGTTGCTACGATGAAAGCGATTCAAGAAGCGACCAAAACTGCTCATCCCGATACGATTGAACGGAAGGTTGTTGAAGAAGAGATACTTGGGTTTGAACACCGTAAGGAAGAGGTCACCTCGCATATTGATCAGGAAGAAAAAGTGATAGCAAATGCTCAATCCTGCGGCAGAGCGGCGACTGAAATGTCCAGACAGCCTAAACAAGGCACTCAGTCTCCTAAAATAAAAGAATCCTTATTTCCAAAGAGAGTAGGTGAAAAATTTCGAAGCAGACGTCACGGTAACCGGGACATTTTAACAAATGGAACACATGATTCACCTACTCCAAGTAATCAATGTAGGCTGGTTGCTTCCGCAAATTGTCCTGCAAAACCTATCACTTCACCAACTGTTGAGAATCTCTTAAAGGCCGACCTTTGCTTAGGCCCTCAAGGTTTGAAACTTACACTCGAAGACAGGCTTGGTGGTGACTCACACAAAAATGGAGGCCCTAGTCGAGAGGAAAGGATTTTGGGAGAAATGGAGCAACAACTGTCTTCCTTCCTTGCTGAGGGGAATCATGACACAAGCTTAACGGCTGGATCTCAACAAAACTATAACCAGGTGATTGATGGAATCATAGCTGCCCCGCTTCCCGACAAGCAAGCCAACCAACCCCCTGGGGAATTGGTCTGGAAGATAGATAACGAAAGTCTTCCAGGATTTGAGGGATCTGGTACAATTGTTATGTCGTTTCATTTCTATAGTGGGATCCAAGGCACCGAACATCCAAACCCTGGAAATGAATACAAGGGAACATCTTACAAGGCGTACCTACCCGAAACAAAAGAAGGAAAACACATCTTCAAGTTGCTACGAAAAGCATTTGATGCTCGATTGTTATTTACTATTGTAAGTGGTACTTCCGACGGAGTTGGGTGTGTTGATTTAAAAGACATCGAACTGAAGACGTCTTTTGCAAGGAACTTAAGAACTGGTTACCCAGATCCCAGCTATTTGACAAGGGACATTGAAGTCAGGGTTGTAATACCGAACATGAGGAAGTCATACCAGTACGCTCTTTTTGGCAGTTTTCTTGTTATCGGTCAAACCATCGCCTTATGGGAAGTTTGTTATGACAAGTATGGATGCTTCAACTATGCCCCGCCCTTTCACAACTTCTTGATGAGGCTTCCACAAGAACCTTCGATCGTAAACACGACATTTTTCCTTTACACAAGAGCCAATCAAAACATCGCTCAATTAATAGATGACAGCGACCCCATAAAACTCGAGAATTCCAACTTTGATATTTTCAGGAGAACCATTATCATCTGTCACGGTTGGACTGACAACGGGCGTGGTAGTTCTAACGAACACTGGGGATACAGAATGAGAGATGCACTTTTGACCCGGGAAGACAGCAATGTCATTTTGACGGATTGGTCCGGAGGTGCTTTCGAATCCTATGGACAGTCCACTGGGAATGCTCGTCTTGTCGGCGCTCAAATTGCCGAACTTATAAAGATCATAATCAAAAGAAACGGCGATTCTAAGGGTTTGGCAAACAGGTTCTATCTCATCGGGTTCAGCCTTGGAGCTCAAATTACTGGTTATGCCGGGAGCCGTCTTCGCCAAGAGGGAATGAAGCTCAGCCGCATCACGGGTTTAGATCCCGCCAGTCCATTTTTCACTTTCCATGATCCCCTTGTCCGTTTGGATCCAACAGATGCCAAATACGTAGACGTCATTCACACCGATATGCCATTATATGGTACACCCCAAAACGTTGGCCATATTGACTTTTATCCAAATGGTGGAGCAGACCAGCCTGGATGCAACTCTGGACTTCAAGAGATCCTCGCTGGAAAAAGAAGCTGTGATCACCACAGGTCTCCAGAGTACTACATAGCATCGGTACATAACCTTTGTTCATGGGAGGCGTATCCATGCCGCAGCTACATCTGGTATCGTTTGGGGTTTTGCTCCACATGCGATGGAAAATGTCCATTATTGGGGTACGATGCTGATCGGACAATGAAGAAAGGATCACATTACCTGACTACAAATTCTAAGAGGCCATTTTGTGCACAGAGTCCTCCAGCCCGATGGTTATACTGAATCAGCGTGAAAACAGTAGAAAAGAAATTTATCAACAGCCTCAAAGAAGTTAACTTATTATGTTATCTAATAAAGGGGATTCGTTAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P81139	Pancreatic lipase-related protein 2 OS=Cavia porcellus OX=10141 GN=PNLIPRP2 PE=1 SV=1
Q5BKQ4	Inactive pancreatic lipase-related protein 1 OS=Mus musculus OX=10090 GN=Pnliprp1 PE=1 SV=2
P54316	Inactive pancreatic lipase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Pnliprp1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011038 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01661 all species →	Macro	Macro domain	Domain	Interproscan
PF18102 all species →	DTC	Deltex C-terminal domain	Domain	Interproscan
PF00151 all species →	Lipase	Lipase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002589 all species →	Domain	Macro domain	Interproscan
IPR000734 all species →	Family	Triacylglycerol lipase family	Interproscan
IPR033906 all species →	Domain	Lipase, N-terminal	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR039396 all species →	Domain	Deltex, C-terminal	Interproscan
IPR039399 all species →	Homologous_superfamily	Deltex, C-terminal domain superfamily	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR043472 all species →	Homologous_superfamily	Macro domain-like	Interproscan
IPR013818 all species →	Domain	Lipase	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11610 all species →	LIPASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0016042 all species →	Biological Process	lipid catabolic process	Interproscan
GO:0016298 all species →	Molecular Function	lipase activity	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0091.g7.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.