Detailed information of amic_s0092.g53.t3 in Acropora microphthalma

Genomic Location: sc0000092_pilon:537709...558716
NR annotation: XP_029195768.2, leucine-rich repeat-containing protein 9-like isoform X3 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZRR7Leucine-rich repeat-containing protein 9 OS=Homo sapiens OX=9606 GN=LRRC9 PE=1 SV=2
A0JM56Leucine-rich repeat-containing protein 9 OS=Xenopus tropicalis OX=8364 GN=lrrc9 PE=2 SV=2
Q8CDN9Leucine-rich repeat-containing protein 9 OS=Mus musculus OX=10090 GN=Lrrc9 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002466 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12799
all species →
LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan
PF14580
all species →
LRR_9Leucine-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR025875
all species →
RepeatLeucine rich repeat 4Interproscan
IPR050836
all species →
FamilySDS22/Internalin LRR-containingInterproscan
IPR003591
all species →
RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46652
all species →
LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0092.g53.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP