Detailed information of amic_s0092.g85.t1 in Acropora microphthalma

Genomic Location: sc0000092_pilon:869241...889518
NR annotation: XP_029195761.2, calmodulin-regulated spectrin-associated protein 1-B-like isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5T5Y3Calmodulin-regulated spectrin-associated protein 1 OS=Homo sapiens OX=9606 GN=CAMSAP1 PE=1 SV=2
A2AHC3Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1
Q6IRN6Calmodulin-regulated spectrin-associated protein 1 OS=Xenopus laevis OX=8355 GN=camsap1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002025 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11971
all species →
CAMSAP_CHCAMSAP CH domainDomainInterproscan
PF17095
all species →
CAMSAP_CC1Spectrin-binding region of Ca2+-CalmodulinFamilyInterproscan
PF08683
all species →
CAMSAP_CKKMicrotubule-binding calmodulin-regulated spectrin-associatedDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014797
all species →
DomainCKK domainInterproscan
IPR036872
all species →
Homologous_superfamilyCH domain superfamilyInterproscan
IPR022613
all species →
DomainCalmodulin-regulated spectrin-associated protein-like, Calponin-homology domainInterproscan
IPR032940
all species →
FamilyCalmodulin-regulated spectrin-associated proteinInterproscan
IPR031372
all species →
Conserved_siteCAMSAP, spectrin and Ca2+/calmodulin-binding regionInterproscan
IPR038209
all species →
Homologous_superfamilyCKK domain superfamilyInterproscan
IPR011033
all species →
Homologous_superfamilyPRC-barrel-like superfamilyInterproscan
IPR001715
all species →
DomainCalponin homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21595
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008017
all species →
Molecular Functionmicrotubule bindingInterproscan
GO:0005516
all species →
Molecular Functioncalmodulin bindingInterproscan
GO:0007026
all species →
Biological Processnegative regulation of microtubule depolymerizationInterproscan
GO:0031122
all species →
Biological Processcytoplasmic microtubule organizationInterproscan
GO:0036449
all species →
Cellular Componentmicrotubule minus-endInterproscan
GO:0051011
all species →
Molecular Functionmicrotubule minus-end bindingInterproscan
GO:0030507
all species →
Molecular Functionspectrin bindingInterproscan
GO:0031175
all species →
Biological Processneuron projection developmentInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0092.g85.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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